| Domain | Name | Category | Type |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | Family | Homologous superfamily |
| IPR016135 | Ubiquitin-conjugating enzyme/RWD-like | Family | Homologous superfamily |
| IPR019162 | Fanconi anemia complex, subunit FancL, WD-repeat containing domain | Domain | Domain |
| IPR026848 | E3 ubiquitin-protein ligase FANCL | Family | Family |
| IPR026850 | FANCL C-terminal domain | Domain | Domain |
| IPR043003 | FANCL, UBC-like domain 3 superfamily | Family | Homologous superfamily |
| IPR043898 | FANCL, UBC-like domain 2 | Domain | Domain |
| IPR044037 | FANCL, UBC-like domain 3 | Domain | Domain |