| Domain | Name | Category | Type |
| IPR000146 | Fructose-1,6-bisphosphatase class 1 | Family | Family |
| IPR020548 | Fructose-1,6-bisphosphatase, active site | Site | Active site |
| IPR028343 | Fructose-1,6-bisphosphatase | Family | Family |
| IPR033391 | Fructose-1-6-bisphosphatase class I, N-terminal | Domain | Domain |
| IPR044015 | Fructose-1-6-bisphosphatase class 1, C-terminal | Domain | Domain |