Entity Details

Primary name LSM6_HUMAN
Entity type UniProt
Source Source Link

Details

AccessionP62312
EntryNameLSM6_HUMAN
FullNameU6 snRNA-associated Sm-like protein LSm6
TaxID9606
Evidenceevidence at protein level
Length80
SequenceStatuscomplete
DateCreated2004-07-05
DateModified2021-06-02

Ontological Relatives

GenesLSM6

GO terms

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GOName
GO:0000398 mRNA splicing, via spliceosome
GO:0000932 P-body
GO:0003723 RNA binding
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005688 U6 snRNP
GO:0005730 nucleolus
GO:0005732 sno(s)RNA-containing ribonucleoprotein complex
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0006402 mRNA catabolic process
GO:0008033 tRNA processing
GO:0008380 RNA splicing
GO:0030490 maturation of SSU-rRNA
GO:0030532 small nuclear ribonucleoprotein complex
GO:0043928 exonucleolytic catabolism of deadenylated mRNA
GO:0046540 U4/U6 x U5 tri-snRNP complex
GO:0046982 protein heterodimerization activity
GO:0071005 U2-type precatalytic spliceosome
GO:0120115 Lsm2-8 complex

Subcellular Location

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Subcellular Location
Cytoplasm
Nucleus

Domains

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DomainNameCategoryType
IPR001163 LSM domain, eukaryotic/archaea-typeDomainDomain
IPR010920 LSM domain superfamilyFamilyHomologous superfamily
IPR016487 Sm-like protein Lsm6/SmFFamilyFamily

Diseases

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Drugs

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DrugNameSourceType
DB02745 UridineDrugbanksmall molecule
DB03685 Uridine monophosphateDrugbanksmall molecule
DB04272 Citric acidDrugbanksmall molecule

Interactions

23 interactions

InteractorPartnerSourcesPublicationsLink
LSM6_HUMANRUXF_HUMANBioGRID, MINT22365833 details
LSM6_HUMANLSM2_HUMANBioGRID, DIP, HPRD, IntAct, MINT11920408 19628699 22365833 22939629 26344197 28514442 29395067 32296183 details
LSM6_HUMANLSM1_HUMANBioGRID, DIP, HPRD, IntAct11920408 15231747 19628699 28514442 29395067 details
LSM6_HUMANDPOD2_HUMANBioGRID, HPRD, IntAct15231747 details
LSM6_HUMANPATL1_HUMANBioGRID, IntAct28514442 32296183 details
LSM6_HUMANLSM7_HUMANBioGRID, HPRD, IntAct, MINT11920408 15231747 22365833 22939629 26344197 28514442 details
LSM6_HUMANLSM8_HUMANBioGRID, HPRD, IntAct11920408 15231747 22939629 27173435 28514442 unassigned1312 details
LSM6_HUMANSMD2_HUMANBioGRID, HPRD, IntAct, MINT15231747 22365833 28514442 details
LSM6_HUMANLSM5_HUMANBioGRID, HPRD, IntAct, MINT11920408 15231747 22365833 22939629 25416956 26344197 28514442 32296183 details
LSM6_HUMANSMN_HUMANBioGRID, HPRD10851237 details
LSM6_HUMANLSM3_HUMANBioGRID, HPRD, IntAct11920408 15231747 22939629 25416956 26344197 28514442 32296183 details
LSM6_HUMANA4_HUMANBioGRID21832049 details
LSM6_HUMANICLN_HUMANBioGRID, IntAct, MINT22365833 25416956 28514442 32296183 details
LSM6_HUMANSDCB1_HUMANBioGRID, IntAct25416956 32296183 details
LSM6_HUMANTADBP_HUMANBioGRID24825905 details
LSM6_HUMANMCRS1_HUMANBioGRID, HPRD, IntAct15231747 details
LSM6_HUMANPRP4_HUMANBioGRID, IntAct19615732 27173435 28514442 unassigned1312 details
LSM6_HUMANTHOC4_HUMANBioGRID, IntAct27173435 unassigned1312 details
LSM6_HUMANPRPF3_HUMANBioGRID, IntAct27173435 28514442 unassigned1312 details
LSM6_HUMANLSM4_HUMANBioGRID, IntAct11920408 22939629 26344197 27247266 28514442 29395067 details
LSM6_HUMANPPIH_HUMANBioGRID, IntAct27173435 unassigned1312 details
LSM6_HUMANLS14A_HUMANBioGRID29510985 details
LSM6_HUMANSART3_HUMANBioGRID, IntAct19615732 27173435 28514442 unassigned1312 details