| Domain | Name | Category | Type |
| IPR000637 | HMG-I/HMG-Y, DNA-binding, conserved site | Site | Conserved site |
| IPR001214 | SET domain | Domain | Domain |
| IPR001841 | Zinc finger, RING-type | Domain | Domain |
| IPR001965 | Zinc finger, PHD-type | Domain | Domain |
| IPR003616 | Post-SET domain | Domain | Domain |
| IPR003888 | FY-rich, N-terminal | Domain | Domain |
| IPR003889 | FY-rich, C-terminal | Domain | Domain |
| IPR009071 | High mobility group box domain | Domain | Domain |
| IPR011011 | Zinc finger, FYVE/PHD-type | Family | Homologous superfamily |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | Family | Homologous superfamily |
| IPR019787 | Zinc finger, PHD-finger | Domain | Domain |
| IPR034732 | Extended PHD (ePHD) domain | Domain | Domain |
| IPR036910 | High mobility group box domain superfamily | Family | Homologous superfamily |
| IPR037877 | Histone-lysine N-methyltransferase 2C | Family | Family |
| IPR041967 | KMT2C, ePHD1 | Domain | Domain |
| IPR041968 | KMT2C, ePHD2 | Domain | Domain |