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Entity Details
Primary name
SNR40_HUMAN
Entity type
UniProt
Source
Source Link
Details
Accession
Q96DI7
EntryName
SNR40_HUMAN
FullName
U5 small nuclear ribonucleoprotein 40 kDa protein
TaxID
9606
Evidence
evidence at protein level
Length
357
SequenceStatus
complete
DateCreated
2005-06-07
DateModified
2021-06-02
Ontological Relatives
Genes
SNRNP40
GO terms
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GO
Name
GO:0000375
RNA splicing, via transesterification reactions
GO:0000398
mRNA splicing, via spliceosome
GO:0003723
RNA binding
GO:0005654
nucleoplasm
GO:0005682
U5 snRNP
GO:0005732
sno(s)RNA-containing ribonucleoprotein complex
GO:0005829
cytosol
GO:0006396
RNA processing
GO:0008380
RNA splicing
GO:0016607
nuclear speck
GO:0071007
U2-type catalytic step 2 spliceosome
GO:0071013
catalytic step 2 spliceosome
Subcellular Location
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Subcellular Location
Nucleus
Domains
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Domain
Name
Category
Type
IPR001680
WD40 repeat
Repeat
Repeat
IPR015943
WD40/YVTN repeat-like-containing domain superfamily
Family
Homologous superfamily
IPR019775
WD40 repeat, conserved site
Site
Conserved site
IPR020472
G-protein beta WD-40 repeat
Repeat
Repeat
IPR036322
WD40-repeat-containing domain superfamily
Family
Homologous superfamily
Diseases
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Drugs
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Interactions
18 interactions
Interactor
Partner
Sources
Publications
Link
SNR40_HUMAN
U5S1_HUMAN
BioGRID, IntAct, UniProt
16723661
17353931
26186194
26344197
28514442
28515276
9774689
details
SNR40_HUMAN
PRP8_HUMAN
BioGRID, IntAct, UniProt
16723661
17353931
22939629
26186194
26344197
28514442
28515276
34079125
9774689
details
SNR40_HUMAN
U520_HUMAN
BioGRID, IntAct, UniProt
16723661
17353931
22939629
26186194
26344197
28514442
9774689
details
SNR40_HUMAN
DDR1_HUMAN
BioGRID, HPRD, IntAct
16169070
details
SNR40_HUMAN
PPA5_HUMAN
HPRD, IntAct
16169070
details
SNR40_HUMAN
GFAP_HUMAN
IntAct
32814053
details
SNR40_HUMAN
GRN_HUMAN
IntAct
32814053
details
SNR40_HUMAN
PRKN_HUMAN
IntAct
32814053
details
SNR40_HUMAN
ATX1_HUMAN
IntAct
32814053
details
SNR40_HUMAN
A4_HUMAN
BioGRID
21832049
details
SNR40_HUMAN
DDX23_HUMAN
BioGRID, IntAct, UniProt
26186194
28514442
9774689
details
SNR40_HUMAN
ZNHI2_HUMAN
BioGRID, IntAct
26186194
28514442
28561026
details
SNR40_HUMAN
CUL4B_HUMAN
BioGRID
17041588
details
SNR40_HUMAN
SRRM1_HUMAN
BioGRID
16159877
details
SNR40_HUMAN
PML_HUMAN
BioGRID
18212063
details
SNR40_HUMAN
RARA_HUMAN
BioGRID
18212063
details
SNR40_HUMAN
PRP19_HUMAN
BioGRID
29395067
details
SNR40_HUMAN
SNR40_HUMAN
HPRD
9774689
details
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