| GO | Name |
| GO:0000786 | nucleosome |
| GO:0000792 | heterochromatin |
| GO:0003682 | chromatin binding |
| GO:0005634 | nucleus |
| GO:0005654 | nucleoplasm |
| GO:0005730 | nucleolus |
| GO:0005737 | cytoplasm |
| GO:0005829 | cytosol |
| GO:0005886 | plasma membrane |
| GO:0035064 | methylated histone binding |
| GO:0044030 | regulation of DNA methylation |
| GO:0045814 | negative regulation of gene expression, epigenetic |
| GO:0045869 | negative regulation of single stranded viral RNA replication via double stranded DNA intermediate |
| GO:0045892 | negative regulation of transcription, DNA-templated |
| GO:0090309 | positive regulation of DNA methylation-dependent heterochromatin assembly |