| Domain | Name | Category | Type |
| IPR006089 | Acyl-CoA dehydrogenase, conserved site | Site | Conserved site |
| IPR006091 | Acyl-CoA oxidase/dehydrogenase, central domain | Domain | Domain |
| IPR009075 | Acyl-CoA dehydrogenase/oxidase C-terminal | Domain | Domain |
| IPR009100 | Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily | Family | Homologous superfamily |
| IPR013786 | Acyl-CoA dehydrogenase/oxidase, N-terminal | Domain | Domain |
| IPR036250 | Acyl-CoA dehydrogenase-like, C-terminal | Family | Homologous superfamily |
| IPR037069 | Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily | Family | Homologous superfamily |