| GO | Name |
| GO:0000785 | chromatin |
| GO:0000978 | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0001227 | DNA-binding transcription repressor activity, RNA polymerase II-specific |
| GO:0001228 | DNA-binding transcription activator activity, RNA polymerase II-specific |
| GO:0002053 | positive regulation of mesenchymal cell proliferation |
| GO:0005634 | nucleus |
| GO:0005654 | nucleoplasm |
| GO:0005829 | cytosol |
| GO:0006357 | regulation of transcription by RNA polymerase II |
| GO:0030326 | embryonic limb morphogenesis |
| GO:0042472 | inner ear morphogenesis |
| GO:0042474 | middle ear morphogenesis |
| GO:0045880 | positive regulation of smoothened signaling pathway |
| GO:0048664 | neuron fate determination |
| GO:0048701 | embryonic cranial skeleton morphogenesis |
| GO:0048844 | artery morphogenesis |
| GO:0051216 | cartilage development |
| GO:0060021 | roof of mouth development |
| GO:0070570 | regulation of neuron projection regeneration |
| GO:0071837 | HMG box domain binding |
| GO:0097150 | neuronal stem cell population maintenance |
| GO:0100026 | positive regulation of DNA repair by transcription from RNA polymerase II promoter |