| GO | Name |
| GO:0000122 | negative regulation of transcription by RNA polymerase II |
| GO:0000792 | heterochromatin |
| GO:0000978 | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0001701 | in utero embryonic development |
| GO:0001833 | inner cell mass cell proliferation |
| GO:0001843 | neural tube closure |
| GO:0003281 | ventricular septum development |
| GO:0005634 | nucleus |
| GO:0005654 | nucleoplasm |
| GO:0005667 | transcription regulator complex |
| GO:0005737 | cytoplasm |
| GO:0006357 | regulation of transcription by RNA polymerase II |
| GO:0007507 | heart development |
| GO:0008134 | transcription factor binding |
| GO:0009888 | tissue development |
| GO:0019827 | stem cell population maintenance |
| GO:0021915 | neural tube development |
| GO:0030326 | embryonic limb morphogenesis |
| GO:0032991 | protein-containing complex |
| GO:0043231 | intracellular membrane-bounded organelle |
| GO:0045944 | positive regulation of transcription by RNA polymerase II |
| GO:0046872 | metal ion binding |