| GO | Name |
| GO:0000122 | negative regulation of transcription by RNA polymerase II |
| GO:0000785 | chromatin |
| GO:0000976 | transcription cis-regulatory region binding |
| GO:0000978 | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0000987 | cis-regulatory region sequence-specific DNA binding |
| GO:0001162 | RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding |
| GO:0001227 | DNA-binding transcription repressor activity, RNA polymerase II-specific |
| GO:0001228 | DNA-binding transcription activator activity, RNA polymerase II-specific |
| GO:0001710 | mesodermal cell fate commitment |
| GO:0001711 | endodermal cell fate commitment |
| GO:0001712 | ectodermal cell fate commitment |
| GO:0001714 | endodermal cell fate specification |
| GO:0001824 | blastocyst development |
| GO:0001829 | trophectodermal cell differentiation |
| GO:0001832 | blastocyst growth |
| GO:0003130 | BMP signaling pathway involved in heart induction |
| GO:0003677 | DNA binding |
| GO:0003682 | chromatin binding |
| GO:0003700 | DNA-binding transcription factor activity |
| GO:0005634 | nucleus |
| GO:0005654 | nucleoplasm |
| GO:0005667 | transcription regulator complex |
| GO:0005730 | nucleolus |
| GO:0005737 | cytoplasm |
| GO:0005739 | mitochondrion |
| GO:0005829 | cytosol |
| GO:0006355 | regulation of transcription, DNA-templated |
| GO:0006357 | regulation of transcription by RNA polymerase II |
| GO:0006366 | transcription by RNA polymerase II |
| GO:0008134 | transcription factor binding |
| GO:0009786 | regulation of asymmetric cell division |
| GO:0010033 | response to organic substance |
| GO:0010468 | regulation of gene expression |
| GO:0010628 | positive regulation of gene expression |
| GO:0010629 | negative regulation of gene expression |
| GO:0017053 | transcription repressor complex |
| GO:0019827 | stem cell population maintenance |
| GO:0019955 | cytokine binding |
| GO:0030718 | germ-line stem cell population maintenance |
| GO:0031490 | chromatin DNA binding |
| GO:0031625 | ubiquitin protein ligase binding |
| GO:0032526 | response to retinoic acid |
| GO:0035019 | somatic stem cell population maintenance |
| GO:0035198 | miRNA binding |
| GO:0043565 | sequence-specific DNA binding |
| GO:0045165 | cell fate commitment |
| GO:0045596 | negative regulation of cell differentiation |
| GO:0045892 | negative regulation of transcription, DNA-templated |
| GO:0045893 | positive regulation of transcription, DNA-templated |
| GO:0045944 | positive regulation of transcription by RNA polymerase II |
| GO:0045955 | negative regulation of calcium ion-dependent exocytosis |
| GO:0048863 | stem cell differentiation |
| GO:0051898 | negative regulation of protein kinase B signaling |
| GO:0060261 | positive regulation of transcription initiation from RNA polymerase II promoter |
| GO:0060391 | positive regulation of SMAD protein signal transduction |
| GO:0060795 | cell fate commitment involved in formation of primary germ layer |
| GO:0060913 | cardiac cell fate determination |
| GO:0060965 | negative regulation of gene silencing by miRNA |
| GO:0070974 | POU domain binding |
| GO:0071837 | HMG box domain binding |
| GO:0090081 | regulation of heart induction by regulation of canonical Wnt signaling pathway |
| GO:0090263 | positive regulation of canonical Wnt signaling pathway |
| GO:0090308 | regulation of DNA methylation-dependent heterochromatin assembly |
| GO:1902894 | negative regulation of pri-miRNA transcription by RNA polymerase II |
| GO:1990830 | cellular response to leukemia inhibitory factor |
| GO:1990837 | sequence-specific double-stranded DNA binding |