| GO | Name |
| GO:0000978 | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0001657 | ureteric bud development |
| GO:0001880 | Mullerian duct regression |
| GO:0005634 | nucleus |
| GO:0005654 | nucleoplasm |
| GO:0005737 | cytoplasm |
| GO:0005829 | cytosol |
| GO:0006468 | protein phosphorylation |
| GO:0007179 | transforming growth factor beta receptor signaling pathway |
| GO:0009653 | anatomical structure morphogenesis |
| GO:0030154 | cell differentiation |
| GO:0030509 | BMP signaling pathway |
| GO:0030901 | midbrain development |
| GO:0030902 | hindbrain development |
| GO:0045597 | positive regulation of cell differentiation |
| GO:0045893 | positive regulation of transcription, DNA-templated |
| GO:0046872 | metal ion binding |
| GO:0051216 | cartilage development |
| GO:0060348 | bone development |
| GO:0060395 | SMAD protein signal transduction |
| GO:0070411 | I-SMAD binding |
| GO:0071144 | heteromeric SMAD protein complex |
| GO:0071407 | cellular response to organic cyclic compound |