| GO | Name |
| GO:0000122 | negative regulation of transcription by RNA polymerase II |
| GO:0000278 | mitotic cell cycle |
| GO:0000775 | chromosome, centromeric region |
| GO:0000791 | euchromatin |
| GO:0000792 | heterochromatin |
| GO:0000978 | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
| GO:0001741 | XY body |
| GO:0003677 | DNA binding |
| GO:0003682 | chromatin binding |
| GO:0003886 | DNA (cytosine-5-)-methyltransferase activity |
| GO:0005634 | nucleus |
| GO:0005654 | nucleoplasm |
| GO:0005737 | cytoplasm |
| GO:0006306 | DNA methylation |
| GO:0006346 | DNA methylation-dependent heterochromatin assembly |
| GO:0006349 | regulation of gene expression by genetic imprinting |
| GO:0007283 | spermatogenesis |
| GO:0007568 | aging |
| GO:0008134 | transcription factor binding |
| GO:0008168 | methyltransferase activity |
| GO:0009636 | response to toxic substance |
| GO:0010212 | response to ionizing radiation |
| GO:0010216 | maintenance of DNA methylation |
| GO:0010288 | response to lead ion |
| GO:0010942 | positive regulation of cell death |
| GO:0016363 | nuclear matrix |
| GO:0030182 | neuron differentiation |
| GO:0032355 | response to estradiol |
| GO:0032776 | DNA methylation on cytosine |
| GO:0033189 | response to vitamin A |
| GO:0042220 | response to cocaine |
| GO:0042493 | response to drug |
| GO:0042802 | identical protein binding |
| GO:0043045 | DNA methylation involved in embryo development |
| GO:0043046 | DNA methylation involved in gamete generation |
| GO:0044027 | hypermethylation of CpG island |
| GO:0046872 | metal ion binding |
| GO:0071230 | cellular response to amino acid stimulus |
| GO:0071361 | cellular response to ethanol |
| GO:0071456 | cellular response to hypoxia |
| GO:0097284 | hepatocyte apoptotic process |
| GO:0106363 | protein-cysteine methyltransferase activity |