| GO | Name |
| GO:0000122 | negative regulation of transcription by RNA polymerase II |
| GO:0001503 | ossification |
| GO:0001570 | vasculogenesis |
| GO:0001649 | osteoblast differentiation |
| GO:0001701 | in utero embryonic development |
| GO:0001708 | cell fate specification |
| GO:0001755 | neural crest cell migration |
| GO:0001947 | heart looping |
| GO:0002052 | positive regulation of neuroblast proliferation |
| GO:0002053 | positive regulation of mesenchymal cell proliferation |
| GO:0003007 | heart morphogenesis |
| GO:0003140 | determination of left/right asymmetry in lateral mesoderm |
| GO:0003323 | type B pancreatic cell development |
| GO:0004930 | G protein-coupled receptor activity |
| GO:0005113 | patched binding |
| GO:0005634 | nucleus |
| GO:0005737 | cytoplasm |
| GO:0005794 | Golgi apparatus |
| GO:0005886 | plasma membrane |
| GO:0005901 | caveola |
| GO:0005929 | cilium |
| GO:0007224 | smoothened signaling pathway |
| GO:0007228 | positive regulation of hh target transcription factor activity |
| GO:0007368 | determination of left/right symmetry |
| GO:0007371 | ventral midline determination |
| GO:0007389 | pattern specification process |
| GO:0007417 | central nervous system development |
| GO:0007494 | midgut development |
| GO:0008284 | positive regulation of cell population proliferation |
| GO:0009952 | anterior/posterior pattern specification |
| GO:0009953 | dorsal/ventral pattern formation |
| GO:0010468 | regulation of gene expression |
| GO:0010628 | positive regulation of gene expression |
| GO:0010629 | negative regulation of gene expression |
| GO:0014069 | postsynaptic density |
| GO:0016021 | integral component of membrane |
| GO:0021542 | dentate gyrus development |
| GO:0021696 | cerebellar cortex morphogenesis |
| GO:0021794 | thalamus development |
| GO:0021904 | dorsal/ventral neural tube patterning |
| GO:0021910 | smoothened signaling pathway involved in ventral spinal cord patterning |
| GO:0021938 | smoothened signaling pathway involved in regulation of cerebellar granule cell precursor cell proliferation |
| GO:0021953 | central nervous system neuron differentiation |
| GO:0021987 | cerebral cortex development |
| GO:0030335 | positive regulation of cell migration |
| GO:0030425 | dendrite |
| GO:0030666 | endocytic vesicle membrane |
| GO:0030857 | negative regulation of epithelial cell differentiation |
| GO:0031069 | hair follicle morphogenesis |
| GO:0034504 | protein localization to nucleus |
| GO:0035264 | multicellular organism growth |
| GO:0040018 | positive regulation of multicellular organism growth |
| GO:0042307 | positive regulation of protein import into nucleus |
| GO:0042475 | odontogenesis of dentin-containing tooth |
| GO:0043025 | neuronal cell body |
| GO:0043066 | negative regulation of apoptotic process |
| GO:0043231 | intracellular membrane-bounded organelle |
| GO:0043392 | negative regulation of DNA binding |
| GO:0043524 | negative regulation of neuron apoptotic process |
| GO:0044294 | dendritic growth cone |
| GO:0044295 | axonal growth cone |
| GO:0045880 | positive regulation of smoothened signaling pathway |
| GO:0045892 | negative regulation of transcription, DNA-templated |
| GO:0045893 | positive regulation of transcription, DNA-templated |
| GO:0045944 | positive regulation of transcription by RNA polymerase II |
| GO:0046622 | positive regulation of organ growth |
| GO:0048143 | astrocyte activation |
| GO:0048468 | cell development |
| GO:0048565 | digestive tract development |
| GO:0048568 | embryonic organ development |
| GO:0048589 | developmental growth |
| GO:0048741 | skeletal muscle fiber development |
| GO:0048745 | smooth muscle tissue development |
| GO:0048846 | axon extension involved in axon guidance |
| GO:0048853 | forebrain morphogenesis |
| GO:0048873 | homeostasis of number of cells within a tissue |
| GO:0050679 | positive regulation of epithelial cell proliferation |
| GO:0050821 | protein stabilization |
| GO:0051451 | myoblast migration |
| GO:0051799 | negative regulation of hair follicle development |
| GO:0060170 | ciliary membrane |
| GO:0060242 | contact inhibition |
| GO:0060413 | atrial septum morphogenesis |
| GO:0060644 | mammary gland epithelial cell differentiation |
| GO:0060684 | epithelial-mesenchymal cell signaling |
| GO:0061053 | somite development |
| GO:0061113 | pancreas morphogenesis |
| GO:0070986 | left/right axis specification |
| GO:0071397 | cellular response to cholesterol |
| GO:0071679 | commissural neuron axon guidance |
| GO:0072285 | mesenchymal to epithelial transition involved in metanephric renal vesicle formation |
| GO:0090190 | positive regulation of branching involved in ureteric bud morphogenesis |
| GO:0097731 | 9+0 non-motile cilium |
| GO:1901215 | negative regulation of neuron death |
| GO:1904754 | positive regulation of vascular associated smooth muscle cell migration |
| GO:2000036 | regulation of stem cell population maintenance |
| GO:2000179 | positive regulation of neural precursor cell proliferation |
| GO:2000826 | regulation of heart morphogenesis |