| GO | Name |
| GO:0001741 | XY body |
| GO:0002039 | p53 binding |
| GO:0004197 | cysteine-type endopeptidase activity |
| GO:0004843 | thiol-dependent deubiquitinase |
| GO:0005634 | nucleus |
| GO:0005737 | cytoplasm |
| GO:0005829 | cytosol |
| GO:0006111 | regulation of gluconeogenesis |
| GO:0006283 | transcription-coupled nucleotide-excision repair |
| GO:0006511 | ubiquitin-dependent protein catabolic process |
| GO:0007275 | multicellular organism development |
| GO:0008022 | protein C-terminus binding |
| GO:0008134 | transcription factor binding |
| GO:0010216 | maintenance of DNA methylation |
| GO:0016579 | protein deubiquitination |
| GO:0016605 | PML body |
| GO:0031625 | ubiquitin protein ligase binding |
| GO:0031647 | regulation of protein stability |
| GO:0032088 | negative regulation of NF-kappaB transcription factor activity |
| GO:0032435 | negative regulation of proteasomal ubiquitin-dependent protein catabolic process |
| GO:0032991 | protein-containing complex |
| GO:0035520 | monoubiquitinated protein deubiquitination |
| GO:0035616 | histone H2B conserved C-terminal lysine deubiquitination |
| GO:0042752 | regulation of circadian rhythm |
| GO:0042802 | identical protein binding |
| GO:0043065 | positive regulation of apoptotic process |
| GO:0048511 | rhythmic process |
| GO:0050821 | protein stabilization |
| GO:0051090 | regulation of DNA-binding transcription factor activity |
| GO:0070536 | protein K63-linked deubiquitination |
| GO:0101005 | deubiquitinase activity |
| GO:1901537 | positive regulation of DNA demethylation |
| GO:1905279 | regulation of retrograde transport, endosome to Golgi |
| GO:1990380 | Lys48-specific deubiquitinase activity |