Entity Details

Primary name LCT
Entity type gene
Source Source Link

Details

PrimaryID3938
RefseqGeneNG_008104
SymbolLCT
Namelactase
Chromosome2
Location2q21.3
TaxID9606
Statuslive
SourceGenomegenomic
SourceOriginnatural
CreationDate1998-08-27
ModificationDate2021-06-11

Ontological Relatives

UniProt IDsLPH_HUMAN

GO terms

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GOName
GO:0000016 lactase activity
GO:0005783 endoplasmic reticulum
GO:0005886 plasma membrane
GO:0005887 integral component of plasma membrane
GO:0005975 carbohydrate metabolic process
GO:0008422 beta-glucosidase activity
GO:0016020 membrane
GO:0016324 apical plasma membrane
GO:0017042 glycosylceramidase activity
GO:0044245 polysaccharide digestion

Diseases

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Disease IDSourceNameDescription
223000 OMIMCongenital lactase deficiency (COLACD)Autosomal recessive, rare and severe gastrointestinal disorder. It is characterized by watery diarrhea in infants fed with breast milk or other lactose-containing formulas. An almost total lack of LCT activity is found in jejunal biopsy material of patients with congenital lactase deficiency. Opposite to congenital lactase deficiency, also known as lactose intolerance, is the most common enzyme deficiency worldwide. It is caused by developmental down-regulation of lactase activity during childhood or early adulthood. The decline of lactase activity is a normal physiological phenomenon; however, the majority of Northern Europeans have the ability to maintain lactase activity and digest lactose throughout life (lactase persistence). The down-regulation of lactase activity operates at the transcriptional level and it is associated with a noncoding variation in the MCM6 gene, located in the upstream vicinity of LCT. The disease is caused by variants affecting the gene represented in this entry.

Interactions

5 interactions

InteractorPartnerSourcesPublicationsLink
LCTSRCMINT17053785 details
LCTCANXBioGRID, HPRD11751874 details
LCTHSPA5BioGRID, HPRD11751874 details
LCTESR2BioGRID29509190 details
LCTDDX39BBioGRID32989256 details