Entity Details

Primary name PRP6_HUMAN
Entity type UniProt
Source Source Link

Details

AccessionO94906
EntryNamePRP6_HUMAN
FullNamePre-mRNA-processing factor 6
TaxID9606
Evidenceevidence at protein level
Length941
SequenceStatuscomplete
DateCreated2002-10-19
DateModified2021-06-02

Ontological Relatives

GenesPRPF6

GO terms

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GOName
GO:0000244 spliceosomal tri-snRNP complex assembly
GO:0000245 spliceosomal complex assembly
GO:0000375 RNA splicing, via transesterification reactions
GO:0000398 mRNA splicing, via spliceosome
GO:0003713 transcription coactivator activity
GO:0003723 RNA binding
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005681 spliceosomal complex
GO:0005682 U5 snRNP
GO:0006403 RNA localization
GO:0008380 RNA splicing
GO:0016020 membrane
GO:0016607 nuclear speck
GO:0043021 ribonucleoprotein complex binding
GO:0045944 positive regulation of transcription by RNA polymerase II
GO:0046540 U4/U6 x U5 tri-snRNP complex
GO:0050681 androgen receptor binding
GO:0071005 U2-type precatalytic spliceosome
GO:0071013 catalytic step 2 spliceosome

Subcellular Location

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Subcellular Location
Nucleus
Nucleus speckle

Domains

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DomainNameCategoryType
IPR003107 HAT (Half-A-TPR) repeatRepeatRepeat
IPR010491 PRP1 splicing factor, N-terminalDomainDomain
IPR011990 Tetratricopeptide-like helical domain superfamilyFamilyHomologous superfamily
IPR019734 Tetratricopeptide repeatRepeatRepeat
IPR027108 Pre-mRNA-processing factor 6/Prp1/STA1FamilyFamily

Diseases

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Disease IDSourceNameDescription
613983 OMIMRetinitis pigmentosa 60 (RP60)A retinal dystrophy belonging to the group of pigmentary retinopathies. Retinitis pigmentosa is characterized by retinal pigment deposits visible on fundus examination and primary loss of rod photoreceptor cells followed by secondary loss of cone photoreceptors. Patients typically have night vision blindness and loss of midperipheral visual field. As their condition progresses, they lose their far peripheral visual field and eventually central vision as well. The disease may be caused by variants affecting the gene represented in this entry. Cells from RP60 patients show intron retention for pre-mRNA bearing specific splicing signals.

Interactions

38 interactions

InteractorPartnerSourcesPublicationsLink
PRP6_HUMANARAF_HUMANBioGRID, HPRD, IntAct10848612 12620389 details
PRP6_HUMANCD2B2_HUMANBioGRID, HPRD, IntAct, MINT15840814 17353931 22365833 22939629 26344197 27173435 28514442 28561026 unassigned1312 details
PRP6_HUMANPRP31_HUMANBioGRID, MINT, UniProt16723661 22365833 22939629 26344197 details
PRP6_HUMANRED_HUMANBioGRID, MINT22365833 details
PRP6_HUMANSRRM2_HUMANBioGRID, MINT22365833 22939629 details
PRP6_HUMANPRP8_HUMANBioGRID, IntAct, UniProt16723661 22939629 26344197 27173435 28515276 34079125 unassigned1312 details
PRP6_HUMANU520_HUMANBioGRID, IntAct, UniProt16723661 22939629 26344197 27173435 unassigned1312 details
PRP6_HUMANU5S1_HUMANBioGRID, IntAct, UniProt16723661 26344197 27173435 28515276 unassigned1312 details
PRP6_HUMANPRPF3_HUMANBioGRID, IntAct, UniProt16723661 22939629 26344197 28514442 details
PRP6_HUMANTXN4A_HUMANBioGRID, IntAct, UniProt16723661 28514442 details
PRP6_HUMANNAL12_HUMANI2D32226298 details
PRP6_HUMANSNUT1_HUMANBioGRID, UniProt16723661 22939629 26344197 details
PRP6_HUMANPRP6_HUMANBioGRID, HPRD, UniProt10848612 12039962 16723661 details
PRP6_HUMANTXN4B_HUMANBioGRID, HPRD15161931 details
PRP6_HUMANRAF1_HUMANBioGRID10848612 details
PRP6_HUMANTIM44_HUMANBioGRID10848612 details
PRP6_HUMAN1433B_HUMANBioGRID10848612 details
PRP6_HUMANANDR_HUMANBioGRID, HPRD12039962 details
PRP6_HUMANSUMO2_HUMANBioGRID32786267 details
PRP6_HUMANPHLA3_HUMANIntAct17353931 details
PRP6_HUMANRSMB_HUMANIntAct17353931 details
PRP6_HUMANMYC_HUMANBioGRID, IntAct17314511 17353931 21150319 29467282 details
PRP6_HUMANSMCA2_HUMANBioGRID, DIP, HPRD16341228 details
PRP6_HUMANSF3A2_HUMANBioGRID, MINT17332742 details
PRP6_HUMANMDM2_HUMANIntAct20195357 details
PRP6_HUMANMLF2_HUMANIntAct25036637 details
PRP6_HUMANPSMD2_HUMANIntAct25036637 details
PRP6_HUMANPTG3L_HUMANIntAct25036637 details
PRP6_HUMANAASD1_HUMANIntAct25036637 details
PRP6_HUMANRIOK1_HUMANBioGRID, IntAct27173435 unassigned1312 details
PRP6_HUMANSMU1_HUMANBioGRID, IntAct27173435 unassigned1312 details
PRP6_HUMANGGYF2_HUMANBioGRID20696395 details
PRP6_HUMANCTNB1_HUMANBioGRID16230076 27684187 details
PRP6_HUMANZNHI2_HUMANBioGRID28561026 details
PRP6_HUMANFGF11_HUMANBioGRID28027390 details
PRP6_HUMANESR1_HUMANBioGRID, HPRD12039962 23403292 details
PRP6_HUMANSMC3_HUMANBioGRID31010829 details
PRP6_HUMANGCR_HUMANHPRD12039962 details