| GO | Name |
| GO:0005113 | patched binding |
| GO:0005119 | smoothened binding |
| GO:0005813 | centrosome |
| GO:0005829 | cytosol |
| GO:0005930 | axoneme |
| GO:0007601 | visual perception |
| GO:0007608 | sensory perception of smell |
| GO:0034464 | BBSome |
| GO:0036064 | ciliary basal body |
| GO:0043001 | Golgi to plasma membrane protein transport |
| GO:0045494 | photoreceptor cell maintenance |
| GO:0050896 | response to stimulus |
| GO:0060170 | ciliary membrane |
| GO:0060271 | cilium assembly |
| GO:0061512 | protein localization to cilium |
| GO:1905515 | non-motile cilium assembly |