Entity Details

Primary name CLRN1
Entity type gene
Source Source Link

Details

PrimaryID7401
RefseqGeneNG_009168
SymbolCLRN1
Nameclarin 1
Chromosome3
Location3q25.1
TaxID9606
Statuslive
SourceGenomegenomic
SourceOriginnatural
CreationDate2001-02-18
ModificationDate2021-06-11

Ontological Relatives

UniProt IDsCLRN1_HUMAN

GO terms

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GOName
GO:0005886 plasma membrane
GO:0005902 microvillus
GO:0007015 actin filament organization
GO:0007601 visual perception
GO:0007605 sensory perception of sound
GO:0010592 positive regulation of lamellipodium assembly
GO:0015630 microtubule cytoskeleton
GO:0016021 integral component of membrane
GO:0030027 lamellipodium
GO:0030140 trans-Golgi network transport vesicle
GO:0032420 stereocilium
GO:0045178 basal part of cell
GO:0045494 photoreceptor cell maintenance
GO:0048870 cell motility
GO:0050896 response to stimulus
GO:0050953 sensory perception of light stimulus
GO:0050957 equilibrioception
GO:0060088 auditory receptor cell stereocilium organization

Diseases

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Disease IDSourceNameDescription
276902 OMIMUsher syndrome 3A (USH3A)USH is a genetically heterogeneous condition characterized by the association of retinitis pigmentosa with sensorineural deafness. Age at onset and differences in auditory and vestibular function distinguish Usher syndrome type 1 (USH1), Usher syndrome type 2 (USH2) and Usher syndrome type 3 (USH3). USH3 is characterized by postlingual, progressive hearing loss, variable vestibular dysfunction, and onset of retinitis pigmentosa symptoms, including nyctalopia, constriction of the visual fields, and loss of central visual acuity, usually by the second decade of life. The disease is caused by variants affecting the gene represented in this entry.
614180 OMIMRetinitis pigmentosa 61 (RP61)A retinal dystrophy belonging to the group of pigmentary retinopathies. Retinitis pigmentosa is characterized by retinal pigment deposits visible on fundus examination and primary loss of rod photoreceptor cells followed by secondary loss of cone photoreceptors. Patients typically have night vision blindness and loss of midperipheral visual field. As their condition progresses, they lose their far peripheral visual field and eventually central vision as well. The disease is caused by variants affecting the gene represented in this entry.

Interactions

29 interactions

InteractorPartnerSourcesPublicationsLink
CLRN1FAM24BBioGRID, IntAct32296183 details
CLRN1CTXN3BioGRID, IntAct32296183 details
CLRN1TMEM239BioGRID, IntAct32296183 details
CLRN1SLC34A3BioGRID, IntAct32296183 details
CLRN1SEC22BBioGRID, IntAct32296183 details
CLRN1TMEM140BioGRID, IntAct32296183 details
CLRN1CANT1BioGRID, IntAct32296183 details
CLRN1DRAM1BioGRID, IntAct32296183 details
CLRN1TMEM147BioGRID, IntAct32296183 details
CLRN1C2CD2LBioGRID, IntAct32296183 details
CLRN1MFSD5BioGRID, IntAct32296183 details
CLRN1TMPPEBioGRID, IntAct32296183 details
CLRN1FUT9BioGRID, IntAct32296183 details
CLRN1CLDN19BioGRID, IntAct32296183 details
CLRN1MGST3BioGRID, IntAct32296183 details
CLRN1ALG8BioGRID, IntAct32296183 details
CLRN1TMEM50BBioGRID, IntAct32296183 details
CLRN1NRMBioGRID, IntAct32296183 details
CLRN1ITGAMBioGRID, IntAct32296183 details
CLRN1BRICD5BioGRID, IntAct32296183 details
CLRN1TMEM86BBioGRID, IntAct32296183 details
CLRN1ZDHHC15BioGRID, IntAct32296183 details
CLRN1CCL4L1IntAct32296183 details
CLRN1CCL4L2BioGRID, IntAct32296183 details
CLRN1TMPRSS4BioGRID, IntAct32296183 details
CLRN1TMEM222BioGRID, IntAct32296183 details
CLRN1UNC50BioGRID, IntAct32296183 details
CLRN1TMEM31BioGRID32296183 details
CLRN1TMIEBioGRID32296183 details