| GO | Name |
| GO:0000122 | negative regulation of transcription by RNA polymerase II |
| GO:0001831 | trophectodermal cellular morphogenesis |
| GO:0001842 | neural fold formation |
| GO:0001889 | liver development |
| GO:0001890 | placenta development |
| GO:0001892 | embryonic placenta development |
| GO:0001893 | maternal placenta development |
| GO:0001944 | vasculature development |
| GO:0001947 | heart looping |
| GO:0002085 | inhibition of neuroepithelial cell differentiation |
| GO:0005125 | cytokine activity |
| GO:0005615 | extracellular space |
| GO:0007420 | brain development |
| GO:0008083 | growth factor activity |
| GO:0009880 | embryonic pattern specification |
| GO:0010085 | polarity specification of proximal/distal axis |
| GO:0010470 | regulation of gastrulation |
| GO:0010575 | positive regulation of vascular endothelial growth factor production |
| GO:0010721 | negative regulation of cell development |
| GO:0010862 | positive regulation of pathway-restricted SMAD protein phosphorylation |
| GO:0016015 | morphogen activity |
| GO:0019827 | stem cell population maintenance |
| GO:0022409 | positive regulation of cell-cell adhesion |
| GO:0030509 | BMP signaling pathway |
| GO:0032927 | positive regulation of activin receptor signaling pathway |
| GO:0033505 | floor plate morphogenesis |
| GO:0035987 | endodermal cell differentiation |
| GO:0042074 | cell migration involved in gastrulation |
| GO:0043280 | positive regulation of cysteine-type endopeptidase activity involved in apoptotic process |
| GO:0045766 | positive regulation of angiogenesis |
| GO:0045944 | positive regulation of transcription by RNA polymerase II |
| GO:0048327 | axial mesodermal cell fate specification |
| GO:0048382 | mesendoderm development |
| GO:0048546 | digestive tract morphogenesis |
| GO:0048701 | embryonic cranial skeleton morphogenesis |
| GO:0048859 | formation of anatomical boundary |
| GO:0050679 | positive regulation of epithelial cell proliferation |
| GO:0051091 | positive regulation of DNA-binding transcription factor activity |
| GO:0060136 | embryonic process involved in female pregnancy |
| GO:0060137 | maternal process involved in parturition |
| GO:0060391 | positive regulation of SMAD protein signal transduction |
| GO:0060395 | SMAD protein signal transduction |
| GO:0060460 | left lung morphogenesis |
| GO:0060766 | negative regulation of androgen receptor signaling pathway |
| GO:0060802 | epiblast cell-extraembryonic ectoderm cell signaling involved in anterior/posterior axis specification |
| GO:0070374 | positive regulation of ERK1 and ERK2 cascade |
| GO:0070698 | type I activin receptor binding |
| GO:0090010 | transforming growth factor beta receptor signaling pathway involved in primitive streak formation |
| GO:1900164 | nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry |
| GO:1900224 | positive regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry |
| GO:1901164 | negative regulation of trophoblast cell migration |
| GO:1901383 | negative regulation of chorionic trophoblast cell proliferation |
| GO:2000036 | regulation of stem cell population maintenance |