Entity Details

Primary name USB1
Entity type gene
Source Source Link

Details

PrimaryID79650
RefseqGeneNG_027698
SymbolUSB1
NameU6 snRNA biogenesis phosphodiesterase 1
Chromosome16
Location16q21
TaxID9606
Statuslive
SourceGenomegenomic
SourceOriginnatural
CreationDate2001-03-12
ModificationDate2021-06-11

Ontological Relatives

UniProt IDsUSB1_HUMAN

GO terms

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GOName
GO:0000175 3'-5'-exoribonuclease activity
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0008380 RNA splicing
GO:0034477 U6 snRNA 3'-end processing
GO:0045171 intercellular bridge
GO:1990838 poly(U)-specific exoribonuclease activity, producing 3' uridine cyclic phosphate ends

Diseases

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Disease IDSourceNameDescription
604173 OMIMPoikiloderma with neutropenia (PN)A genodermatosis characterized by poikiloderma, pachyonychia and chronic neutropenia. The disorder starts as a papular erythematous rash on the limbs during the first year of life. It gradually spreads centripetally and, as the papular rash resolves, hypo- and hyperpigmentation result, with development of telangiectasias. Another skin manifestation is pachyonychia, but alopecia and leukoplakia are distinctively absent. Patients have recurrent pneumonias that usually result in reactive airway disease and/or chronic cough. One of the most important extracutaneous symptoms is an increased susceptibility to infections, mainly affecting the respiratory system, primarily due to a chronic neutropenia and to neutrophil functional defects. Bone marrow abnormalities account for neutropenia and may evolve into myelodysplasia associated with the risk of leukemic transformation. Poikiloderma with neutropenia shows phenotypic overlap with Rothmund-Thomson syndrome. The disease is caused by variants affecting the gene represented in this entry.

Interactions

32 interactions

InteractorPartnerSourcesPublicationsLink
USB1SMAD4BioGRID, HPRD, MINT15231748 details
USB1PRPF19BioGRID, IntAct23022480 26186194 28514442 details
USB1CDC5LBioGRID, IntAct23022480 26186194 28514442 details
USB1PLRG1BioGRID, IntAct23022480 26186194 28514442 details
USB1WDR83BioGRID, IntAct26186194 28514442 details
USB1KNSTRNBioGRID, IntAct26186194 28514442 details
USB1PPIEBioGRID, IntAct26186194 28514442 details
USB1RAB43IntAct28514442 details
USB1ISY1-RAB43IntAct28514442 details
USB1ISY1BioGRID, IntAct26186194 28514442 details
USB1RBM22BioGRID, IntAct26186194 28514442 details
USB1XAB2BioGRID, IntAct26186194 28514442 details
USB1DHX35BioGRID, IntAct26186194 28514442 details
USB1CRNKL1BioGRID, IntAct26186194 28514442 details
USB1GPATCH1BioGRID, IntAct26186194 28514442 details
USB1ESS2BioGRID, IntAct26186194 28514442 details
USB1CCDC12BioGRID, IntAct26186194 28514442 details
USB1EAPPBioGRID, IntAct26186194 28514442 details
USB1CWF19L2BioGRID, IntAct26186194 28514442 details
USB1SNW1BioGRID, IntAct26186194 28514442 details
USB1BUD31BioGRID, IntAct26186194 28514442 details
USB1SYF2BioGRID, IntAct26186194 28514442 details
USB1BCAS2BioGRID, IntAct26186194 28514442 details
USB1SNRNP200BioGRID, IntAct28514442 details
USB1CDC40BioGRID, IntAct26186194 28514442 details
USB1AQRBioGRID, IntAct26186194 28514442 details
USB1CSNK2A1BioGRID26186194 details
USB1SNX27BioGRID26496610 details
USB1SMIM12BioGRID26496610 details
USB1TOMM5BioGRID26496610 details
USB1ELAVL1BioGRID19322201 details
USB1DDX58BioGRID32513696 details