Entity Details

Primary name LSM1_HUMAN
Entity type UniProt
Source Source Link

Details

AccessionO15116
EntryNameLSM1_HUMAN
FullNameU6 snRNA-associated Sm-like protein LSm1
TaxID9606
Evidenceevidence at protein level
Length133
SequenceStatuscomplete
DateCreated2002-04-16
DateModified2021-06-02

Ontological Relatives

GenesLSM1

GO terms

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GOName
GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000339 RNA cap binding
GO:0000375 RNA splicing, via transesterification reactions
GO:0000932 P-body
GO:0003723 RNA binding
GO:0003729 mRNA binding
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0006397 mRNA processing
GO:0008380 RNA splicing
GO:0016070 RNA metabolic process
GO:0019827 stem cell population maintenance
GO:0030424 axon
GO:0030425 dendrite
GO:0036002 pre-mRNA binding
GO:0043025 neuronal cell body
GO:0043928 exonucleolytic catabolism of deadenylated mRNA
GO:0045665 negative regulation of neuron differentiation
GO:0071044 histone mRNA catabolic process
GO:1990124 messenger ribonucleoprotein complex
GO:1990726 Lsm1-7-Pat1 complex

Subcellular Location

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Subcellular Location
Cytoplasm

Domains

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DomainNameCategoryType
IPR001163 LSM domain, eukaryotic/archaea-typeDomainDomain
IPR010920 LSM domain superfamilyFamilyHomologous superfamily
IPR034104 Sm-like protein Lsm1DomainDomain
IPR044642 U6 snRNA-associated Sm-like protein Lsm1/8FamilyFamily

Diseases

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Interactions

46 interactions

InteractorPartnerSourcesPublicationsLink
LSM1_HUMANCLIC1_HUMANBioGRID, HPRD, IntAct14667819 29395067 32296183 details
LSM1_HUMANLSM3_HUMANBioGRID, DIP, HPRD, IntAct11920408 15231747 19628699 25416956 26344197 26871637 29395067 32296183 details
LSM1_HUMANLSM2_HUMANBioGRID, DIP, HPRD, IntAct11920408 15231747 19628699 26344197 29395067 32296183 details
LSM1_HUMANLSM4_HUMANBioGRID, DIP, IntAct11920408 15231747 19628699 25416956 26344197 27247266 29395067 details
LSM1_HUMANEXOS8_HUMANBioGRID, HPRD, IntAct15231747 details
LSM1_HUMANLSM6_HUMANBioGRID, DIP, HPRD, IntAct11920408 15231747 19628699 28514442 29395067 details
LSM1_HUMANRENT2_HUMANBioGRID, HPRD, IntAct15231747 details
LSM1_HUMANVPS11_HUMANBioGRID, HPRD, IntAct15231747 details
LSM1_HUMANSYNC_HUMANBioGRID, HPRD, IntAct15231747 details
LSM1_HUMANPSB8_HUMANBioGRID, HPRD, IntAct15231747 32296183 details
LSM1_HUMANPSB5_HUMANBioGRID, HPRD, IntAct15231747 32296183 details
LSM1_HUMANUXT_HUMANBioGRID, HPRD, IntAct15231747 details
LSM1_HUMANTM214_HUMANBioGRID, HPRD, IntAct15231747 details
LSM1_HUMANGRHPR_HUMANBioGRID, HPRD, IntAct15231747 details
LSM1_HUMANHS90A_HUMANBioGRID, HPRD, IntAct15231747 details
LSM1_HUMANRRP1B_HUMANBioGRID, HPRD, IntAct15231747 details
LSM1_HUMANF136A_HUMANIntAct15231747 details
LSM1_HUMANGSTA4_HUMANBioGRID, IntAct32296183 details
LSM1_HUMANAGR2_HUMANBioGRID, IntAct32296183 details
LSM1_HUMANPATL1_HUMANBioGRID, IntAct22939629 29395067 32296183 details
LSM1_HUMANTCL1B_HUMANBioGRID, IntAct32296183 details
LSM1_HUMANAGR3_HUMANBioGRID, IntAct32296183 details
LSM1_HUMANBEX5_HUMANBioGRID, IntAct32296183 details
LSM1_HUMANMCCD1_HUMANBioGRID, IntAct32296183 details
LSM1_HUMANDAPL1_HUMANBioGRID, IntAct32296183 details
LSM1_HUMANAPBB1_HUMANIntAct32814053 details
LSM1_HUMANCOMT_HUMANIntAct32814053 details
LSM1_HUMANEXOS6_HUMANBioGRID, HPRD15231747 details
LSM1_HUMANN4BP1_HUMANBioGRID15231747 details
LSM1_HUMANMPU1_HUMANBioGRID15231747 details
LSM1_HUMANDHE3_HUMANBioGRID15231747 details
LSM1_HUMANTFCP2_HUMANBioGRID26871637 details
LSM1_HUMANNDUF3_HUMANHPRD15231747 details
LSM1_HUMANPAN2_HUMANBioGRID, IntAct27173435 unassigned1312 details
LSM1_HUMANSWAHA_HUMANIntActunassigned1312 details
LSM1_HUMANLSM5_HUMANBioGRID, DIP, HPRD, IntAct11920408 19628699 28514442 details
LSM1_HUMANLSM7_HUMANBioGRID, DIP, HPRD11920408 19628699 29395067 details
LSM1_HUMANLS14A_HUMANBioGRID29395067 29510985 details
LSM1_HUMANSMN_HUMANBioGRID, HPRD10851237 29395067 details
LSM1_HUMANMEX3B_HUMANBioGRID29395067 details
LSM1_HUMANLSM11_HUMANBioGRID29395067 details
LSM1_HUMANF120C_HUMANBioGRID29395067 details
LSM1_HUMANRU2B_HUMANBioGRID29395067 details
LSM1_HUMANGEMI8_HUMANBioGRID29395067 details
LSM1_HUMANZFHX3_HUMANBioGRID29395067 details
LSM1_HUMANPTPRC_HUMANHPRD8980254 details