| Domain | Name | Category | Type |
| IPR011993 | PH-like domain superfamily | Family | Homologous superfamily |
| IPR021648 | Vacuolar protein sorting protein 36, GLUE domain | Domain | Domain |
| IPR036388 | Winged helix-like DNA-binding domain superfamily | Family | Homologous superfamily |
| IPR036390 | Winged helix DNA-binding domain superfamily | Family | Homologous superfamily |
| IPR037855 | Vacuolar protein sorting protein 36 | Family | Family |
| IPR040608 | Snf8/Vps36 family | Family | Family |