| GO | Name |
| GO:0000122 | negative regulation of transcription by RNA polymerase II |
| GO:0000977 | RNA polymerase II transcription regulatory region sequence-specific DNA binding |
| GO:0000978 | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0001656 | metanephros development |
| GO:0001658 | branching involved in ureteric bud morphogenesis |
| GO:0001701 | in utero embryonic development |
| GO:0002052 | positive regulation of neuroblast proliferation |
| GO:0003682 | chromatin binding |
| GO:0003700 | DNA-binding transcription factor activity |
| GO:0005634 | nucleus |
| GO:0005654 | nucleoplasm |
| GO:0005730 | nucleolus |
| GO:0005737 | cytoplasm |
| GO:0005829 | cytosol |
| GO:0005929 | cilium |
| GO:0005930 | axoneme |
| GO:0006357 | regulation of transcription by RNA polymerase II |
| GO:0007224 | smoothened signaling pathway |
| GO:0007411 | axon guidance |
| GO:0007442 | hindgut morphogenesis |
| GO:0007507 | heart development |
| GO:0008013 | beta-catenin binding |
| GO:0008285 | negative regulation of cell population proliferation |
| GO:0009952 | anterior/posterior pattern specification |
| GO:0009954 | proximal/distal pattern formation |
| GO:0016485 | protein processing |
| GO:0016607 | nuclear speck |
| GO:0017053 | transcription repressor complex |
| GO:0021631 | optic nerve morphogenesis |
| GO:0021766 | hippocampus development |
| GO:0021775 | smoothened signaling pathway involved in ventral spinal cord interneuron specification |
| GO:0021776 | smoothened signaling pathway involved in spinal cord motor neuron cell fate specification |
| GO:0021798 | forebrain dorsal/ventral pattern formation |
| GO:0021819 | layer formation in cerebral cortex |
| GO:0021861 | forebrain radial glial cell differentiation |
| GO:0022018 | lateral ganglionic eminence cell proliferation |
| GO:0030318 | melanocyte differentiation |
| GO:0030324 | lung development |
| GO:0030850 | prostate gland development |
| GO:0032332 | positive regulation of chondrocyte differentiation |
| GO:0033077 | T cell differentiation in thymus |
| GO:0035035 | histone acetyltransferase binding |
| GO:0035108 | limb morphogenesis |
| GO:0036033 | mediator complex binding |
| GO:0042060 | wound healing |
| GO:0042307 | positive regulation of protein import into nucleus |
| GO:0042475 | odontogenesis of dentin-containing tooth |
| GO:0042733 | embryonic digit morphogenesis |
| GO:0042826 | histone deacetylase binding |
| GO:0043066 | negative regulation of apoptotic process |
| GO:0043231 | intracellular membrane-bounded organelle |
| GO:0043585 | nose morphogenesis |
| GO:0043586 | tongue development |
| GO:0043627 | response to estrogen |
| GO:0045060 | negative thymic T cell selection |
| GO:0045665 | negative regulation of neuron differentiation |
| GO:0045669 | positive regulation of osteoblast differentiation |
| GO:0045879 | negative regulation of smoothened signaling pathway |
| GO:0045892 | negative regulation of transcription, DNA-templated |
| GO:0045893 | positive regulation of transcription, DNA-templated |
| GO:0045944 | positive regulation of transcription by RNA polymerase II |
| GO:0046638 | positive regulation of alpha-beta T cell differentiation |
| GO:0046639 | negative regulation of alpha-beta T cell differentiation |
| GO:0046872 | metal ion binding |
| GO:0048557 | embryonic digestive tract morphogenesis |
| GO:0048566 | embryonic digestive tract development |
| GO:0048589 | developmental growth |
| GO:0048593 | camera-type eye morphogenesis |
| GO:0048702 | embryonic neurocranium morphogenesis |
| GO:0048709 | oligodendrocyte differentiation |
| GO:0060021 | roof of mouth development |
| GO:0060364 | frontal suture morphogenesis |
| GO:0060366 | lambdoid suture morphogenesis |
| GO:0060367 | sagittal suture morphogenesis |
| GO:0060594 | mammary gland specification |
| GO:0060831 | smoothened signaling pathway involved in dorsal/ventral neural tube patterning |
| GO:0060840 | artery development |
| GO:0060873 | anterior semicircular canal development |
| GO:0060875 | lateral semicircular canal development |
| GO:0061005 | cell differentiation involved in kidney development |
| GO:0070242 | thymocyte apoptotic process |
| GO:0071625 | vocalization behavior |
| GO:0090090 | negative regulation of canonical Wnt signaling pathway |
| GO:0097421 | liver regeneration |
| GO:0097542 | ciliary tip |
| GO:0097546 | ciliary base |
| GO:0120223 | larynx morphogenesis |
| GO:1901620 | regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning |
| GO:1903010 | regulation of bone development |
| GO:1990837 | sequence-specific double-stranded DNA binding |