Entity Details

Primary name PGBM_HUMAN
Entity type UniProt
Source Source Link

Details

AccessionP98160
EntryNamePGBM_HUMAN
FullNameBasement membrane-specific heparan sulfate proteoglycan core protein
TaxID9606
Evidenceevidence at protein level
Length4391
SequenceStatuscomplete
DateCreated1996-10-01
DateModified2021-06-02

Ontological Relatives

GenesHSPG2

GO terms

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GOName
GO:0001523 retinoid metabolic process
GO:0001525 angiogenesis
GO:0001540 amyloid-beta binding
GO:0005178 integrin binding
GO:0005509 calcium ion binding
GO:0005576 extracellular region
GO:0005604 basement membrane
GO:0005615 extracellular space
GO:0005796 Golgi lumen
GO:0005886 plasma membrane
GO:0005925 focal adhesion
GO:0006024 glycosaminoglycan biosynthetic process
GO:0006027 glycosaminoglycan catabolic process
GO:0006629 lipid metabolic process
GO:0006898 receptor-mediated endocytosis
GO:0006954 inflammatory response
GO:0007420 brain development
GO:0008022 protein C-terminus binding
GO:0009887 animal organ morphogenesis
GO:0009888 tissue development
GO:0016525 negative regulation of angiogenesis
GO:0030021 extracellular matrix structural constituent conferring compression resistance
GO:0030154 cell differentiation
GO:0030198 extracellular matrix organization
GO:0043202 lysosomal lumen
GO:0050750 low-density lipoprotein particle receptor binding
GO:0060548 negative regulation of cell death
GO:0062023 collagen-containing extracellular matrix
GO:0070062 extracellular exosome
GO:0072359 circulatory system development
GO:0098797 plasma membrane protein complex
GO:1905907 negative regulation of amyloid fibril formation
GO:1990000 amyloid fibril formation

Subcellular Location

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Subcellular Location
Secreted

Domains

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DomainNameCategoryType
IPR000034 Laminin IVDomainDomain
IPR000082 SEA domainDomainDomain
IPR000742 EGF-like domainDomainDomain
IPR001791 Laminin G domainDomainDomain
IPR001881 EGF-like calcium-binding domainDomainDomain
IPR002049 Laminin EGF domainDomainDomain
IPR002172 Low-density lipoprotein (LDL) receptor class A repeatRepeatRepeat
IPR003598 Immunoglobulin subtype 2DomainDomain
IPR003599 Immunoglobulin subtypeDomainDomain
IPR007110 Immunoglobulin-like domainDomainDomain
IPR013098 Immunoglobulin I-setDomainDomain
IPR013106 Immunoglobulin V-set domainDomainDomain
IPR013320 Concanavalin A-like lectin/glucanase domain superfamilyFamilyHomologous superfamily
IPR013783 Immunoglobulin-like foldFamilyHomologous superfamily
IPR023415 Low-density lipoprotein (LDL) receptor class A, conserved siteSiteConserved site
IPR036055 LDL receptor-like superfamilyFamilyHomologous superfamily
IPR036179 Immunoglobulin-like domain superfamilyFamilyHomologous superfamily

Diseases

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Disease IDSourceNameDescription
224410 OMIMDyssegmental dysplasia Silverman-Handmaker type (DDSH)The dyssegmental dysplasias are rare, autosomal recessive skeletal dysplasias with anisospondyly and micromelia. There are two recognized types: the severe, lethal DDSH and the milder Rolland-Desbuquois form. Individuals with DDSH also have a flat face, micrognathia, cleft palate and reduced joint mobility, and frequently have an encephalocoele. The endochondral growth plate is short, the calcospherites (which are spherical calcium-phosphorus crystals produced by hypertrophic chondrocytes) are unfused, and there is mucoid degeneration of the resting cartilage. The disease is caused by variants affecting the gene represented in this entry.
255800 OMIMSchwartz-Jampel syndrome (SJS1)Rare autosomal recessive disorder characterized by permanent myotonia (prolonged failure of muscle relaxation) and skeletal dysplasia, resulting in reduced stature, kyphoscoliosis, bowing of the diaphyses and irregular epiphyses. The disease is caused by variants affecting the gene represented in this entry.

Drugs

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DrugNameSourceType
DB00039 PaliferminDrugbankbiotech

Interactions

32 interactions

InteractorPartnerSourcesPublicationsLink
PGBM_HUMANGRN_HUMANHPRD, MINT12900424 details
PGBM_HUMANATN1_HUMANBioGRID, HPRD, IntAct16713569 details
PGBM_HUMANGFI1B_HUMANBioGRID, HPRD, IntAct16713569 details
PGBM_HUMANCAC1A_HUMANBioGRID, IntAct21078624 details
PGBM_HUMANTELT_HUMANBioGRID, IntAct23414517 details
PGBM_HUMANFINC_HUMANBioGRID, IntAct11493006 19738201 details
PGBM_HUMANVGFR2_HUMANmatrixdb, MINT21596751 23374253 details
PGBM_HUMANVGFR1_HUMANmatrixdb21596751 details
PGBM_HUMANFGF7_HUMANBioGRID, HPRD10702276 details
PGBM_HUMANTTHY_HUMANBioGRID, HPRD9307034 details
PGBM_HUMANPRELP_HUMANBioGRID, HPRD11847210 details
PGBM_HUMANFGFP1_HUMANBioGRID, HPRD11148217 details
PGBM_HUMANNID2_HUMANBioGRID, HPRD11493006 9733643 details
PGBM_HUMANFBLN2_HUMANBioGRID, HPRD11493006 7500359 9431988 details
PGBM_HUMANLAMA1_HUMANBioGRID, HPRD9688542 details
PGBM_HUMANPDGFA_HUMANBioGRID, HPRD9692901 details
PGBM_HUMANPDGFB_HUMANBioGRID, HPRD9692901 details
PGBM_HUMANUBC_HUMANBioGRID28190767 details
PGBM_HUMANHS90A_HUMANBioGRID31273033 details
PGBM_HUMANECM1_HUMANHPRD12604605 details
PGBM_HUMANPR40A_HUMANHPRD15231748 details
PGBM_HUMANMCAF1_HUMANHPRD15231748 details
PGBM_HUMANFGF2_HUMANHPRD, matrixdb11847221 24509440 details
PGBM_HUMANITA2_HUMANHPRD15240572 details
PGBM_HUMANCCN2_HUMANHPRD12811819 details
PGBM_HUMANBMP1_HUMANHPRD15591058 details
PGBM_HUMANFBN1_HUMANHPRD15657057 details
PGBM_HUMANVWA1_HUMANHPRD16407285 details
PGBM_HUMANNID1_HUMANHPRD11493006 11574465 details
PGBM_HUMANFBLN1_HUMANHPRD7500359 details
PGBM_HUMANSPRC_HUMANHPRD2745554 details
PGBM_HUMANA4_HUMANHPRD9136074 details