Entity Details

Primary name SF3B4_HUMAN
Entity type UniProt
Source Source Link

Details

AccessionQ15427
EntryNameSF3B4_HUMAN
FullNameSplicing factor 3B subunit 4
TaxID9606
Evidenceevidence at protein level
Length424
SequenceStatuscomplete
DateCreated1997-11-01
DateModified2021-06-02

Ontological Relatives

GenesSF3B4

GO terms

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GOName
GO:0000375 RNA splicing, via transesterification reactions
GO:0000398 mRNA splicing, via spliceosome
GO:0003723 RNA binding
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005681 spliceosomal complex
GO:0005689 U12-type spliceosomal complex
GO:0005730 nucleolus
GO:0006397 mRNA processing
GO:0008380 RNA splicing
GO:0048026 positive regulation of mRNA splicing, via spliceosome
GO:0071005 U2-type precatalytic spliceosome
GO:1990935 splicing factor binding

Subcellular Location

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Subcellular Location
Nucleus

Domains

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DomainNameCategoryType
IPR000504 RNA recognition motif domainDomainDomain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamilyFamilyHomologous superfamily
IPR034158 SF3B4, RNA recognition motif 1DomainDomain
IPR034159 SF3B4, RNA recognition motif 2DomainDomain
IPR035979 RNA-binding domain superfamilyFamilyHomologous superfamily

Diseases

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Disease IDSourceNameDescription
154400 OMIMAcrofacial dysostosis 1, Nager type (AFD1)A form of acrofacial dysostosis, a group of disorders which are characterized by malformation of the craniofacial skeleton and the limbs. The major facial features of AFD1 include downslanted palpebral fissures, midface retrusion, and micrognathia, the latter of which often requires the placement of a tracheostomy in early childhood. Limb defects typically involve the anterior (radial) elements of the upper limbs and manifest as small or absent thumbs, triphalangeal thumbs, radial hyoplasia or aplasia, and radioulnar synostosis. Phocomelia of the upper limbs and, occasionally, lower-limb defects have also been reported. The disease is caused by variants affecting the gene represented in this entry.

Interactions

68 interactions

InteractorPartnerSourcesPublicationsLink
SF3B4_HUMANSTK19_HUMANHPRD, IntAct14667819 details
SF3B4_HUMANCD2B2_HUMANMINT15105431 details
SF3B4_HUMANCREST_HUMANBioGRID, IntAct16189514 25416956 32296183 details
SF3B4_HUMANMK09_HUMANBioGRID, HPRD, IntAct16189514 25416956 32296183 details
SF3B4_HUMANSF3B2_HUMANBioGRID, HPRD, IntAct, MINT, UniProt10490618 16189514 22365833 22939629 24981860 25416956 25737013 32296183 7958871 details
SF3B4_HUMANNCK2_HUMANBioGRID, HPRD, IntAct16189514 25416956 32296183 details
SF3B4_HUMANTCAF1_HUMANBioGRID, HPRD, IntAct, MINT16189514 21516116 25416956 32296183 details
SF3B4_HUMANABL1_HUMANIntAct17474147 details
SF3B4_HUMANFYN_HUMANIntAct17474147 details
SF3B4_HUMANGRB2_HUMANBioGRID, IntAct17474147 21988832 details
SF3B4_HUMANNCK1_HUMANIntAct17474147 details
SF3B4_HUMANITSN1_HUMANBioGRID, IntAct18654987 details
SF3B4_HUMANFRK_HUMANBioGRID, IntAct, MINT21516116 25416956 details
SF3B4_HUMANEWS_HUMANBioGRID, IntAct21988832 24999758 details
SF3B4_HUMANPRP8_HUMANBioGRID, MINT22365833 28515276 details
SF3B4_HUMANU5S1_HUMANBioGRID, MINT22365833 28515276 details
SF3B4_HUMANWDR83_HUMANBioGRID, MINT22365833 details
SF3B4_HUMANRBM10_HUMANBioGRID, IntAct, MINT22365833 26871637 32296183 details
SF3B4_HUMANSPF27_HUMANBioGRID, MINT22365833 details
SF3B4_HUMANCHERP_HUMANBioGRID, MINT22365833 details
SF3B4_HUMANSF01_HUMANBioGRID, MINT22365833 details
SF3B4_HUMANILF3_HUMANBioGRID, MINT22365833 22939629 details
SF3B4_HUMANSRSF6_HUMANBioGRID, MINT22365833 details
SF3B4_HUMANDDX42_HUMANBioGRID, MINT22365833 24981860 details
SF3B4_HUMANDDX17_HUMANBioGRID, MINT22365833 details
SF3B4_HUMANHNRL1_HUMANBioGRID, IntAct, MINT22365833 25416956 details
SF3B4_HUMANRBM4_HUMANBioGRID, MINT22365833 details
SF3B4_HUMANMEP50_HUMANBioGRID, MINT22365833 details
SF3B4_HUMANHNRPD_HUMANBioGRID, MINT22365833 details
SF3B4_HUMANHNRPF_HUMANBioGRID, MINT22365833 details
SF3B4_HUMANHNRH1_HUMANBioGRID, MINT22365833 details
SF3B4_HUMANC19L2_HUMANBioGRID, IntAct25416956 32296183 details
SF3B4_HUMANSC24D_HUMANBioGRID, IntAct25416956 details
SF3B4_HUMANBAG3_HUMANBioGRID, IntAct23824909 25416956 32296183 details
SF3B4_HUMANUBS3A_HUMANBioGRID, IntAct25416956 details
SF3B4_HUMANRBM39_HUMANBioGRID, IntAct25416956 28302793 details
SF3B4_HUMANZCH10_HUMANBioGRID, IntAct25416956 details
SF3B4_HUMANPP16B_HUMANBioGRID, IntAct25416956 31515488 details
SF3B4_HUMANMET17_HUMANBioGRID, IntAct25416956 29892012 details
SF3B4_HUMANHSPB7_HUMANBioGRID, IntAct25416956 details
SF3B4_HUMANBAIP2_HUMANBioGRID, IntAct25416956 details
SF3B4_HUMANNUB1_HUMANBioGRID, IntAct25416956 details
SF3B4_HUMANTRAF4_HUMANBioGRID, IntAct32296183 details
SF3B4_HUMANSYQ_HUMANBioGRID, IntAct32296183 details
SF3B4_HUMANTLE5_HUMANBioGRID, IntAct32296183 details
SF3B4_HUMANZNF48_HUMANBioGRID, IntAct32296183 details
SF3B4_HUMANTFG_HUMANBioGRID, IntAct32296183 details
SF3B4_HUMANRPP25_HUMANBioGRID, IntAct32296183 details
SF3B4_HUMANRAMAC_HUMANBioGRID, IntAct32296183 details
SF3B4_HUMANZNF3_HUMANBioGRID, IntAct32296183 details
SF3B4_HUMANBMR1A_HUMANBioGRID, HPRD15351706 details
SF3B4_HUMANPR40A_HUMANBioGRID16055720 24981860 details
SF3B4_HUMANWBP4_HUMANBioGRID16055720 details
SF3B4_HUMANAPBB1_HUMANBioGRID16055720 details
SF3B4_HUMANFKB1A_HUMANBioGRID25416956 details
SF3B4_HUMANU2AF2_HUMANBioGRID27720643 details
SF3B4_HUMANOGT1_HUMANBioGRID32994395 details
SF3B4_HUMANSF3A2_HUMANBioGRID, MINT12234937 17332742 26344197 details
SF3B4_HUMANANM9_HUMANUniProt25737013 details
SF3B4_HUMANTCRG1_HUMANBioGRID, HPRD15456888 details
SF3B4_HUMANSF3B1_HUMANBioGRID12234937 22939629 26344197 28541300 details
SF3B4_HUMANCDC5L_HUMANBioGRID11101529 details
SF3B4_HUMANSRRM1_HUMANBioGRID16159877 details
SF3B4_HUMANSRRM2_HUMANBioGRID16159877 22939629 details
SF3B4_HUMANTERF2_HUMANBioGRID20811636 details
SF3B4_HUMANGLIP1_HUMANBioGRID23333597 details
SF3B4_HUMANFGF11_HUMANBioGRID28027390 details
SF3B4_HUMANSUMO4_HUMANHPRD16236267 details