Entity Details

Primary name SMCA2_HUMAN
Entity type UniProt
Source Source Link

Details

AccessionP51531
EntryNameSMCA2_HUMAN
FullNameProbable global transcription activator SNF2L2
TaxID9606
Evidenceevidence at protein level
Length1590
SequenceStatuscomplete
DateCreated1996-10-01
DateModified2021-06-02

Ontological Relatives

GenesSMARCA2

GO terms

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GOName
GO:0000122 negative regulation of transcription by RNA polymerase II
GO:0000785 chromatin
GO:0000976 transcription cis-regulatory region binding
GO:0003677 DNA binding
GO:0003682 chromatin binding
GO:0003713 transcription coactivator activity
GO:0004386 helicase activity
GO:0005524 ATP binding
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0006338 chromatin remodeling
GO:0006355 regulation of transcription, DNA-templated
GO:0006357 regulation of transcription by RNA polymerase II
GO:0007286 spermatid development
GO:0007399 nervous system development
GO:0008094 ATPase, acting on DNA
GO:0008285 negative regulation of cell population proliferation
GO:0016514 SWI/SNF complex
GO:0030308 negative regulation of cell growth
GO:0042393 histone binding
GO:0043044 ATP-dependent chromatin remodeling
GO:0043231 intracellular membrane-bounded organelle
GO:0045111 intermediate filament cytoskeleton
GO:0045892 negative regulation of transcription, DNA-templated
GO:0045893 positive regulation of transcription, DNA-templated
GO:0045944 positive regulation of transcription by RNA polymerase II
GO:0070615 nucleosome-dependent ATPase activity
GO:0071564 npBAF complex
GO:0071565 nBAF complex

Subcellular Location

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Subcellular Location
Nucleus

Domains

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DomainNameCategoryType
IPR000330 SNF2, N-terminalDomainDomain
IPR001487 BromodomainDomainDomain
IPR001650 Helicase, C-terminalDomainDomain
IPR006576 BRK domainDomainDomain
IPR014001 Helicase superfamily 1/2, ATP-binding domainDomainDomain
IPR014012 Helicase/SANT-associated domainDomainDomain
IPR014978 Glutamine-Leucine-Glutamine, QLQDomainDomain
IPR018359 Bromodomain, conserved siteSiteConserved site
IPR027417 P-loop containing nucleoside triphosphate hydrolaseFamilyHomologous superfamily
IPR029295 Snf2, ATP coupling domainDomainDomain
IPR030088 SWI/SNF complex subunit SMARCA2FamilyFamily
IPR036427 Bromodomain-like superfamilyFamilyHomologous superfamily
IPR037259 BRK domain superfamilyFamilyHomologous superfamily
IPR038718 SNF2-like, N-terminal domain superfamilyFamilyHomologous superfamily

Diseases

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Disease IDSourceNameDescription
601358 OMIMNicolaides-Baraitser syndrome (NCBRS)A rare disorder characterized by severe mental retardation with absent or limited speech, seizures, short stature, sparse hair, typical facial characteristics, brachydactyly, prominent finger joints and broad distal phalanges. Some of the features are progressive with time. The disease is caused by variants affecting the gene represented in this entry.
181500 OMIMSchizophrenia (SCZD)A complex, multifactorial psychotic disorder or group of disorders characterized by disturbances in the form and content of thought (e.g. delusions, hallucinations), in mood (e.g. inappropriate affect), in sense of self and relationship to the external world (e.g. loss of ego boundaries, withdrawal), and in behavior (e.g bizarre or apparently purposeless behavior). Although it affects emotions, it is distinguished from mood disorders in which such disturbances are primary. Similarly, there may be mild impairment of cognitive function, and it is distinguished from the dementias in which disturbed cognitive function is considered primary. Some patients manifest schizophrenic as well as bipolar disorder symptoms and are often given the diagnosis of schizoaffective disorder. Disease susceptibility may be associated with variants affecting the gene represented in this entry.

Interactions

115 interactions

InteractorPartnerSourcesPublicationsLink
SMCA2_HUMANARI1B_HUMANBioGRID, HPRD, UniProt12200431 22939629 24981860 26344197 31753913 details
SMCA2_HUMANKHDR1_HUMANBioGRID, DIP, HPRD16341228 details
SMCA2_HUMANMECP2_HUMANBioGRID, HPRD, IntAct15696166 20093853 details
SMCA2_HUMANCBX5_HUMANBioGRID, UniProt20011120 20562864 details
SMCA2_HUMANHSPB1_HUMANBioGRID, IntAct25277244 details
SMCA2_HUMANCEBPB_HUMANBioGRID, IntAct10619021 15044620 17257825 21638299 22242598 details
SMCA2_HUMANSDCB1_HUMANBioGRID, IntAct, MINT25416956 25910212 26787460 details
SMCA2_HUMANBEND7_HUMANBioGRID, IntAct25416956 25910212 details
SMCA2_HUMANSSXT_HUMANBioGRID, HPRD, IntAct10072425 11274403 11734557 14603256 22439931 24981860 26186194 26344197 28514442 31753913 details
SMCA2_HUMANREQU_HUMANBioGRID, IntAct, MINT20460684 22334708 24981860 26186194 26344197 28514442 31753913 details
SMCA2_HUMANDPF3_HUMANBioGRID, IntAct18765789 22334708 24981860 26186194 26344197 28514442 31753913 details
SMCA2_HUMANESR1_HUMANBioGRID, HPRD, IntAct31527615 9099865 details
SMCA2_HUMANSIN3A_HUMANBioGRID11238380 12453419 14559996 15314177 26344197 details
SMCA2_HUMANMYB_HUMANBioGRID10619021 details
SMCA2_HUMANANDR_HUMANBioGRID18487222 19762545 28611094 details
SMCA2_HUMANNR4A2_HUMANBioGRID17043312 details
SMCA2_HUMANPITX1_HUMANBioGRID17043312 details
SMCA2_HUMANCEBPA_HUMANBioGRID15107404 16452305 details
SMCA2_HUMANCDX2_HUMANBioGRID19371634 details
SMCA2_HUMANANM5_HUMANBioGRID14559996 details
SMCA2_HUMANSIN3B_HUMANBioGRID14559996 details
SMCA2_HUMANMYC_HUMANBioGRID14559996 29467282 details
SMCA2_HUMANNR0B2_HUMANBioGRID15314177 21262773 21566081 details
SMCA2_HUMANH31_HUMANBioGRID20011120 details
SMCA2_HUMANMDM2_HUMANBioGRID25384516 details
SMCA2_HUMANMDM4_HUMANBioGRID25384516 details
SMCA2_HUMANRAP1A_HUMANBioGRID15207703 details
SMCA2_HUMANARI1A_HUMANBioGRID, UniProt11318604 12200431 14559996 16940996 22939629 24981860 26344197 31753913 8895581 details
SMCA2_HUMANSMRD3_HUMANBioGRID, IntAct14701856 18765789 22939629 24981860 26344197 31753913 details
SMCA2_HUMANACL6B_HUMANBioGRID, HPRD, IntAct12437990 31753913 details
SMCA2_HUMANPRP6_HUMANBioGRID, DIP, HPRD16341228 details
SMCA2_HUMANSODM_HUMANIntAct20195357 details
SMCA2_HUMANGCR_HUMANBioGRID, HPRD, IntAct17043312 20195357 31182584 8223438 details
SMCA2_HUMANETS1_HUMANIntAct20195357 details
SMCA2_HUMANPHS_HUMANIntAct20195357 details
SMCA2_HUMANH2AX_HUMANBioGRID, MINT16932743 20224553 details
SMCA2_HUMANSNIP1_HUMANUniProt15378006 details
SMCA2_HUMANSMRC1_HUMANBioGRID, MINT11238380 12453419 14559996 16230384 16452305 16940996 20460684 22939629 24421395 24981860 26344197 31753913 8895581 details
SMCA2_HUMANHDAC1_HUMANBioGRID, IntAct11238380 12453419 26496610 details
SMCA2_HUMANBCL7A_HUMANBioGRID, IntAct20460684 24981860 26344197 28514442 31753913 details
SMCA2_HUMANSMCE1_HUMANBioGRID, IntAct, MINT14559996 20305087 20460684 22939629 24981860 26186194 26344197 28514442 31753913 8895581 details
SMCA2_HUMANSMRD1_HUMANBioGRID, IntAct14559996 18042045 20305087 20460684 22939629 24981860 26186194 26344197 28514442 31753913 details
SMCA2_HUMANSMRC2_HUMANBioGRID, IntAct, MINT12453419 14559996 16940996 20305087 20460684 21653829 22939629 24981860 26344197 28514442 31753913 8895581 details
SMCA2_HUMANSNF5_HUMANBioGRID, IntAct, MINT11238380 12453419 14559996 18042045 22939629 24981860 26344197 30108113 31753913 31759698 8895581 9744861 details
SMCA2_HUMANPICK1_HUMANMINT21653829 details
SMCA2_HUMANZN821_HUMANMINT21653829 details
SMCA2_HUMANBACD2_HUMANMINT21653829 details
SMCA2_HUMANTACC2_HUMANMINT21653829 details
SMCA2_HUMANSPT4H_HUMANMINT21653829 details
SMCA2_HUMANITPI2_HUMANMINT21653829 details
SMCA2_HUMANSPAG5_HUMANMINT21653829 details
SMCA2_HUMANPP12C_HUMANMINT21653829 details
SMCA2_HUMANLIPA2_HUMANMINT21653829 details
SMCA2_HUMANNUP62_HUMANMINT21653829 details
SMCA2_HUMANNECA2_HUMANMINT21653829 details
SMCA2_HUMANMYO5B_HUMANMINT21653829 details
SMCA2_HUMANMPRIP_HUMANMINT21653829 details
SMCA2_HUMANLAMC1_HUMANMINT21653829 details
SMCA2_HUMANGFAP_HUMANMINT21653829 details
SMCA2_HUMANGCC1_HUMANMINT21653829 details
SMCA2_HUMANG3P_HUMANMINT21653829 details
SMCA2_HUMANDYN2_HUMANMINT21653829 details
SMCA2_HUMANDAB2P_HUMANMINT21653829 details
SMCA2_HUMANCXXC1_HUMANMINT21653829 details
SMCA2_HUMANCNTRB_HUMANMINT21653829 details
SMCA2_HUMANCEP72_HUMANMINT21653829 details
SMCA2_HUMANCC136_HUMANMINT21653829 details
SMCA2_HUMANAPCL_HUMANMINT21653829 details
SMCA2_HUMANANO10_HUMANMINT21653829 details
SMCA2_HUMANACTN2_HUMANMINT21653829 details
SMCA2_HUMANBRCA1_HUMANBioGRID, HPRD15034933 27591253 details
SMCA2_HUMANRPB1_HUMANBioGRID11238380 16341228 8895581 9710619 details
SMCA2_HUMANHDAC2_HUMANBioGRID11238380 12453419 14559996 details
SMCA2_HUMANRBBP4_HUMANBioGRID11238380 12453419 details
SMCA2_HUMANPHB_HUMANBioGRID, HPRD12065415 15141164 details
SMCA2_HUMANACL6A_HUMANBioGRID, HPRD11839798 12437990 14559996 20460684 22939629 24981860 26344197 31753913 8895581 details
SMCA2_HUMANCCNE1_HUMANBioGRID9891079 details
SMCA2_HUMANRUVB1_HUMANBioGRID11839798 details
SMCA2_HUMANCDK8_HUMANBioGRID9710619 details
SMCA2_HUMANZMY11_HUMANBioGRID16565076 details
SMCA2_HUMANSMCA4_HUMANBioGRID14559996 18042045 22939629 24981860 31753913 9128241 details
SMCA2_HUMANBAF_HUMANBioGRID19759913 details
SMCA2_HUMANADDA_HUMANBioGRID17074803 details
SMCA2_HUMANMCPH1_HUMANBioGRID19525936 details
SMCA2_HUMANBAZ1A_HUMANBioGRID16877760 details
SMCA2_HUMANSMRD2_HUMANBioGRID14559996 22939629 24981860 26344197 31753913 details
SMCA2_HUMANTAF1_HUMANBioGRID12453419 details
SMCA2_HUMANCHD3_HUMANBioGRID12453419 28977666 details
SMCA2_HUMANTAF6_HUMANBioGRID12453419 details
SMCA2_HUMANRBBP7_HUMANBioGRID12453419 details
SMCA2_HUMANTBP_HUMANBioGRID12453419 details
SMCA2_HUMANMBD3_HUMANBioGRID12453419 details
SMCA2_HUMANTAF9_HUMANBioGRID12453419 details
SMCA2_HUMANSAP30_HUMANBioGRID12453419 details
SMCA2_HUMANRAN_HUMANBioGRID12453419 details
SMCA2_HUMANSSX2_HUMANBioGRID11274403 22439931 details
SMCA2_HUMANHIF1A_HUMANBioGRID15347669 details
SMCA2_HUMANNONO_HUMANBioGRID18042045 details
SMCA2_HUMANSFPQ_HUMANBioGRID18042045 details
SMCA2_HUMANZMAT3_HUMANBioGRID20460684 details
SMCA2_HUMANGEMI_HUMANBioGRID17261582 details
SMCA2_HUMANSTAT1_HUMANBioGRID21079652 details
SMCA2_HUMANEP300_HUMANBioGRID21079652 details
SMCA2_HUMANCBP_HUMANBioGRID21079652 details
SMCA2_HUMANKAT2B_HUMANBioGRID21079652 details
SMCA2_HUMANKMT2A_HUMANBioGRID12453419 details
SMCA2_HUMANBARD1_HUMANBioGRID27591253 details
SMCA2_HUMANSPTA1_HUMANBioGRID16889989 details
SMCA2_HUMANHIRA_HUMANBioGRID23602572 details
SMCA2_HUMANEZH2_HUMANBioGRID28068325 details
SMCA2_HUMANRB_HUMANBioGRID9326598 details
SMCA2_HUMANE2F1_HUMANBioGRID9326598 details
SMCA2_HUMANERPG3_HUMANBioGRID26030138 details
SMCA2_HUMANERCC6_HUMANBioGRID26030138 details
SMCA2_HUMANNR4A1_HUMANBioGRID33087562 details