| GO | Name |
| GO:0000118 | histone deacetylase complex |
| GO:0000122 | negative regulation of transcription by RNA polymerase II |
| GO:0000776 | kinetochore |
| GO:0000781 | chromosome, telomeric region |
| GO:0000792 | heterochromatin |
| GO:0003682 | chromatin binding |
| GO:0005634 | nucleus |
| GO:0005635 | nuclear envelope |
| GO:0005654 | nucleoplasm |
| GO:0005721 | pericentric heterochromatin |
| GO:0005730 | nucleolus |
| GO:0006974 | cellular response to DNA damage stimulus |
| GO:0007596 | blood coagulation |
| GO:0010369 | chromocenter |
| GO:0016032 | viral process |
| GO:0017053 | transcription repressor complex |
| GO:0030674 | protein-macromolecule adaptor activity |
| GO:0032991 | protein-containing complex |
| GO:0035064 | methylated histone binding |
| GO:0035097 | histone methyltransferase complex |
| GO:0042802 | identical protein binding |
| GO:0042826 | histone deacetylase binding |
| GO:0043021 | ribonucleoprotein complex binding |
| GO:0044877 | protein-containing complex binding |
| GO:0045892 | negative regulation of transcription, DNA-templated |
| GO:0070317 | negative regulation of G0 to G1 transition |
| GO:0090734 | site of DNA damage |
| GO:1990904 | ribonucleoprotein complex |