Entity Details

Primary name IRF6_HUMAN
Entity type UniProt
Source Source Link

Details

AccessionO14896
EntryNameIRF6_HUMAN
FullNameInterferon regulatory factor 6
TaxID9606
Evidenceevidence at protein level
Length467
SequenceStatuscomplete
DateCreated1998-07-15
DateModified2021-06-02

Ontological Relatives

GenesIRF6

GO terms

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GOName
GO:0000785 chromatin
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0002376 immune system process
GO:0003677 DNA binding
GO:0003700 DNA-binding transcription factor activity
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0006357 regulation of transcription by RNA polymerase II
GO:0008285 negative regulation of cell population proliferation
GO:0030054 cell junction
GO:0030216 keratinocyte differentiation
GO:0043565 sequence-specific DNA binding
GO:0043616 keratinocyte proliferation
GO:0045893 positive regulation of transcription, DNA-templated
GO:0045944 positive regulation of transcription by RNA polymerase II
GO:0048468 cell development
GO:0060021 roof of mouth development
GO:0060173 limb development
GO:0060333 interferon-gamma-mediated signaling pathway
GO:0060337 type I interferon signaling pathway
GO:0060644 mammary gland epithelial cell differentiation
GO:0070062 extracellular exosome
GO:1904888 cranial skeletal system development
GO:1990837 sequence-specific double-stranded DNA binding

Subcellular Location

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Subcellular Location
Cytoplasm
Nucleus

Domains

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DomainNameCategoryType
IPR001346 Interferon regulatory factor DNA-binding domainDomainDomain
IPR008984 SMAD/FHA domain superfamilyFamilyHomologous superfamily
IPR017855 SMAD-like domain superfamilyFamilyHomologous superfamily
IPR019471 Interferon regulatory factor-3DomainDomain
IPR019817 Interferon regulatory factor, conserved siteSiteConserved site
IPR036388 Winged helix-like DNA-binding domain superfamilyFamilyHomologous superfamily
IPR036390 Winged helix DNA-binding domain superfamilyFamilyHomologous superfamily

Diseases

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Disease IDSourceNameDescription
119500 OMIMPopliteal pterygium syndrome (PPS)An autosomal dominant disorder characterized by oro-facial, skin and genital anomalies. Expressivity is variable. Clinical features include cleft lip/palate, lower lip cysts, syngnathia, congenital ankyloblepharon filiforme in some cases, bifid scrotum, hypoplastic scrotum, hypoplastic uterus, talipes equinovarus. The disease is caused by variants affecting the gene represented in this entry.
119300 OMIMVan der Woude syndrome 1 (VWS1)An autosomal dominant developmental disorder characterized by lower lip pits, cleft lip and/or cleft palate. The disease is caused by variants affecting the gene represented in this entry.
608864 OMIMNon-syndromic orofacial cleft 6 (OFC6)A birth defect consisting of cleft lips with or without cleft palate. Cleft lips are associated with cleft palate in two-third of cases. A cleft lip can occur on one or both sides and range in severity from a simple notch in the upper lip to a complete opening in the lip extending into the floor of the nostril and involving the upper gum. Disease susceptibility is associated with variants affecting the gene represented in this entry.

Interactions

4 interactions

InteractorPartnerSourcesPublicationsLink
IRF6_HUMANIRF8_HUMANBioGRID, IntAct21903422 details
IRF6_HUMANTLX2_HUMANBioGRID, IntAct20211142 details
IRF6_HUMANRFX3_HUMANBioGRID, IntAct20211142 details
IRF6_HUMANZBTB3_HUMANIntAct20211142 details