Entity Details

Primary name CI072_HUMAN
Entity type UniProt
Source Source Link

Details

AccessionQ96LT7
EntryNameCI072_HUMAN
FullNameGuanine nucleotide exchange C9orf72
TaxID9606
Evidenceevidence at protein level
Length481
SequenceStatuscomplete
DateCreated2005-07-19
DateModified2021-06-02

Ontological Relatives

GenesC9orf72

GO terms

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GOName
GO:0000932 P-body
GO:0001933 negative regulation of protein phosphorylation
GO:0005085 guanyl-nucleotide exchange factor activity
GO:0005615 extracellular space
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005764 lysosome
GO:0005768 endosome
GO:0005776 autophagosome
GO:0005829 cytosol
GO:0006897 endocytosis
GO:0006914 autophagy
GO:0010494 cytoplasmic stress granule
GO:0010506 regulation of autophagy
GO:0016239 positive regulation of macroautophagy
GO:0030425 dendrite
GO:0031267 small GTPase binding
GO:0031965 nuclear membrane
GO:0032045 guanyl-nucleotide exchange factor complex
GO:0034063 stress granule assembly
GO:0043204 perikaryon
GO:0043231 intracellular membrane-bounded organelle
GO:0044295 axonal growth cone
GO:0044304 main axon
GO:0048675 axon extension
GO:0090543 Flemming body
GO:0110053 regulation of actin filament organization
GO:1902774 late endosome to lysosome transport
GO:1903432 regulation of TORC1 signaling
GO:2000785 regulation of autophagosome assembly

Subcellular Location

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Subcellular Location
Cell projection
Cytoplasm
Cytoplasmic vesicle
Endosome
Lysosome
Nucleus
Nucleus membrane
Perikaryon
Secreted

Domains

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DomainNameCategoryType
IPR027819 Guanine nucleotide exchange C9orf72FamilyFamily

Diseases

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Disease IDSourceNameDescription
105550 OMIMFrontotemporal dementia and/or amyotrophic lateral sclerosis 1 (FTDALS1)An autosomal dominant neurodegenerative disorder characterized by adult onset of frontotemporal dementia and/or amyotrophic lateral sclerosis in an affected individual. There is high intrafamilial variation. Frontotemporal dementia is characterized by frontal and temporal lobe atrophy associated with neuronal loss, gliosis, and dementia. Patients exhibit progressive changes in social, behavioral, and/or language function. Amyotrophic lateral sclerosis is characterized by the death of motor neurons in the brain, brainstem, and spinal cord, resulting in fatal paralysis. The disease is caused by variants affecting the gene represented in this entry. In the first intron of the gene, the expansion of a GGGGCC hexanucleotide that can vary from 10 to thousands of repeats, represents the most common genetic cause of both familial and sporadic FTDALS. The hexanucleotide repeat expansion (HRE) is structurally polymorphic and during transcription, is responsible for the formation of RNA and DNA G-quadruplexes resulting in the production of aborted transcripts at the expense of functional transcripts. The accumulation of those aborted transcripts may cause nucleolar stress and indirectly cell death (PubMed:24598541). The expanded GGGGCC repeats are bidirectionally transcribed into repetitive RNA, which forms sense and antisense RNA foci. Remarkably, despite being within a non-coding region, these repetitive RNAs can be translated in every reading frame to form five different dipeptide repeat proteins (DPRs) -- poly-GA, poly-GP, poly-GR, poly-PA and poly-PR -- via a non-canonical mechanism known as repeat-associated non-ATG (RAN) translation. These dipeptide repeat proteins (DPRs) co-aggregate in the characteristic SQSTM1-positive TARDBP negative inclusions found in FTLD/ALS patients with C9orf72 repeat expansion (PubMed:24132570).

Interactions

34 interactions

InteractorPartnerSourcesPublicationsLink
CI072_HUMANEI2BB_HUMANBioGRID, IntAct, MINT21516116 25416956 32296183 details
CI072_HUMANSRPK1_HUMANBioGRID, IntAct23602568 details
CI072_HUMANCRX_HUMANBioGRID, IntAct25416956 details
CI072_HUMANREL_HUMANBioGRID, IntAct25416956 details
CI072_HUMANNMI_HUMANBioGRID, IntAct25416956 details
CI072_HUMANSMCR8_HUMANBioGRID, IntAct, MINT, UniProt27103069 27107012 27617292 29950492 30669939 32296183 details
CI072_HUMANCOIL_HUMANBioGRID, IntAct32296183 details
CI072_HUMANVRTN_HUMANBioGRID, IntAct32296183 details
CI072_HUMANHM20A_HUMANBioGRID, IntAct32296183 details
CI072_HUMANTRI74_HUMANIntAct32296183 details
CI072_HUMANPOP7_HUMANBioGRID, IntAct32296183 details
CI072_HUMANATG13_HUMANBioGRID, IntAct, UniProt27334615 27617292 29950492 30669939 details
CI072_HUMANRAB1A_HUMANIntAct27334615 details
CI072_HUMANWDR41_HUMANBioGRID, MINT, UniProt27103069 27617292 29950492 30669939 details
CI072_HUMANA4_HUMANBioGRID21832049 details
CI072_HUMANCI072_HUMANBioGRID30669939 details
CI072_HUMANTRI73_HUMANBioGRID32296183 details
CI072_HUMANSYN3_HUMANBioGRID32296183 details
CI072_HUMANRBCC1_HUMANBioGRID, IntAct, UniProt20562859 27334615 29950492 30669939 details
CI072_HUMANULK1_HUMANBioGRID, IntAct, MINT, UniProt27103069 27334615 27617292 29950492 30669939 details
CI072_HUMANRB39B_HUMANBioGRID, MINT27103069 27617292 details
CI072_HUMANRAB8B_HUMANBioGRID27103069 details
CI072_HUMANRB33A_HUMANBioGRID27103069 details
CI072_HUMANRAB38_HUMANBioGRID27103069 details
CI072_HUMANRB39A_HUMANBioGRID27103069 details
CI072_HUMANRAB6A_HUMANBioGRID27103069 details
CI072_HUMANRAB12_HUMANBioGRID27103069 details
CI072_HUMANRAB25_HUMANBioGRID27103069 details
CI072_HUMANTBKB1_HUMANBioGRID27103069 details
CI072_HUMANTANK_HUMANBioGRID27103069 details
CI072_HUMANAZI2_HUMANBioGRID27103069 details
CI072_HUMANSYIC_HUMANBioGRID30669939 details
CI072_HUMANATGA1_HUMANBioGRID27617292 30669939 details
CI072_HUMANST7_HUMANBioGRID29395067 details