Entity Details

Primary name DNM3B_HUMAN
Entity type UniProt
Source Source Link

Details

AccessionQ9UBC3
EntryNameDNM3B_HUMAN
FullNameDNA (cytosine-5)-methyltransferase 3B
TaxID9606
Evidenceevidence at protein level
Length853
SequenceStatuscomplete
DateCreated2001-09-26
DateModified2021-06-02

Ontological Relatives

GenesDNMT3B

GO terms

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GOName
GO:0000122 negative regulation of transcription by RNA polymerase II
GO:0001666 response to hypoxia
GO:0003677 DNA binding
GO:0003682 chromatin binding
GO:0003714 transcription corepressor activity
GO:0003886 DNA (cytosine-5-)-methyltransferase activity
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0006306 DNA methylation
GO:0009008 DNA-methyltransferase activity
GO:0009636 response to toxic substance
GO:0010212 response to ionizing radiation
GO:0010628 positive regulation of gene expression
GO:0014823 response to activity
GO:0031000 response to caffeine
GO:0032355 response to estradiol
GO:0033189 response to vitamin A
GO:0042220 response to cocaine
GO:0042493 response to drug
GO:0042826 histone deacetylase binding
GO:0045666 positive regulation of neuron differentiation
GO:0045814 negative regulation of gene expression, epigenetic
GO:0046872 metal ion binding
GO:0051571 positive regulation of histone H3-K4 methylation
GO:0051573 negative regulation of histone H3-K9 methylation
GO:0071455 cellular response to hyperoxia
GO:0071549 cellular response to dexamethasone stimulus

Subcellular Location

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Subcellular Location
Nucleus

Domains

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DomainNameCategoryType
IPR000313 PWWP domainDomainDomain
IPR001525 C-5 cytosine methyltransferaseFamilyFamily
IPR011011 Zinc finger, FYVE/PHD-typeFamilyHomologous superfamily
IPR018117 DNA methylase, C-5 cytosine-specific, active siteSiteActive site
IPR025766 ADD domainDomainDomain
IPR029063 S-adenosyl-L-methionine-dependent methyltransferaseFamilyHomologous superfamily
IPR030488 DNA (cytosine-5)-methyltransferase 3B, ADD domainDomainDomain
IPR040552 DNMT3, cysteine rich ADD domainDomainDomain

Diseases

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Disease IDSourceNameDescription
242860 OMIMImmunodeficiency-centromeric instability-facial anomalies syndrome 1 (ICF1)A rare disorder characterized by a variable immunodeficiency resulting in recurrent infections, facial anomalies, and branching of chromosomes 1, 9, and 16. Other variable symptoms include growth retardation, failure to thrive, and psychomotor retardation. Laboratory studies show limited hypomethylation of DNA in a small fraction of the genome in some, but not all, patients. The disease is caused by variants affecting the gene represented in this entry.
158901 OMIMFacioscapulohumeral muscular dystrophy 2 (FSHD2)A degenerative muscle disease characterized by slowly progressive weakness of the muscles of the face, upper-arm, and shoulder girdle. The onset of symptoms usually occurs in the first or second decade of life. Affected individuals usually present with impairment of upper extremity elevation. This tends to be followed by facial weakness, primarily involving the orbicularis oris and orbicularis oculi muscles. The gene represented in this entry may act as a disease modifier. DNMT3B mutations lead to DUX4 expression in somatic tissues, including muscle cells, when an haplotype on chromosome 4 is permissive for DUX4 expression. Ectopic expression of DUX4 in skeletal muscle activates the expression of stem cell and germline genes, and, when overexpressed in somatic cells, DUX4 can ultimately lead to cell death.

Drugs

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DrugNameSourceType
DB01262 DecitabineDrugbanksmall molecule

Interactions

71 interactions

InteractorPartnerSourcesPublicationsLink
DNM3B_HUMANSUMO1_HUMANBioGRID, HPRD, IntAct11735126 details
DNM3B_HUMANUBC9_HUMANBioGRID, HPRD, IntAct11735126 details
DNM3B_HUMANEZH2_HUMANBioGRID, HPRD, IntAct16357870 22094255 24074865 25531315 27728808 details
DNM3B_HUMANNRIP1_HUMANBioGRID, MINT17972916 details
DNM3B_HUMANCKLF6_HUMANBioGRID, MINT21900206 details
DNM3B_HUMANDUS23_HUMANBioGRID, MINT21900206 details
DNM3B_HUMANTIM16_HUMANBioGRID, MINT21900206 details
DNM3B_HUMANMLP3B_HUMANBioGRID, MINT21900206 details
DNM3B_HUMANPCY2_HUMANBioGRID, MINT21900206 details
DNM3B_HUMANPKHJ1_HUMANBioGRID, MINT21900206 details
DNM3B_HUMANRS10_HUMANBioGRID, MINT21900206 details
DNM3B_HUMANT22D1_HUMANBioGRID, MINT21900206 details
DNM3B_HUMANUBE2W_HUMANBioGRID, MINT21900206 details
DNM3B_HUMANSYWC_HUMANBioGRID, MINT21900206 details
DNM3B_HUMANDNMT1_HUMANBioGRID, HPRD, IntAct12145218 12867029 15120635 21406692 22094255 27728808 29691401 details
DNM3B_HUMANZHX1_HUMANUniProt17303076 details
DNM3B_HUMANDNM3A_HUMANBioGRID, HPRD, IntAct12145218 12867029 14752048 20923784 28514442 details
DNM3B_HUMANSMC2_HUMANBioGRID15148359 details
DNM3B_HUMANKIF4A_HUMANBioGRID15148359 details
DNM3B_HUMANHDAC1_HUMANBioGRID, HPRD12202768 15120635 15148359 16331260 23708667 details
DNM3B_HUMANSMCA5_HUMANBioGRID, HPRD15120635 15148359 details
DNM3B_HUMANCND3_HUMANBioGRID, HPRD15148359 details
DNM3B_HUMANCBX5_HUMANBioGRID, HPRD12867029 15120635 17470536 20923784 details
DNM3B_HUMANDNM3L_HUMANBioGRID, HPRD11934864 12777184 15105426 17687327 24952347 details
DNM3B_HUMANSPI1_HUMANBioGRID, HPRD16331260 details
DNM3B_HUMANTDG_HUMANBioGRID18452947 details
DNM3B_HUMANMBD4_HUMANBioGRID18452947 details
DNM3B_HUMANBAZ2A_HUMANBioGRID16085498 details
DNM3B_HUMANHDAC2_HUMANBioGRID, HPRD15120635 23708667 details
DNM3B_HUMANSUV91_HUMANBioGRID, HPRD15120635 details
DNM3B_HUMANCBX3_HUMANBioGRID15120635 20923784 details
DNM3B_HUMANHELLS_HUMANBioGRID17967891 details
DNM3B_HUMANNEDD8_HUMANBioGRID20847044 details
DNM3B_HUMANH31_HUMANBioGRID26912663 details
DNM3B_HUMANCUL4B_HUMANBioGRID24292684 details
DNM3B_HUMANDDB1_HUMANBioGRID24292684 details
DNM3B_HUMANEED_HUMANBioGRID, HPRD, IntAct16357870 22094255 details
DNM3B_HUMANSETB1_HUMANBioGRID, IntAct16682412 details
DNM3B_HUMANUHRF1_HUMANBioGRID, MINT19798101 22064703 details
DNM3B_HUMANEHMT2_HUMANDIP18953337 details
DNM3B_HUMANSMC4_HUMANBioGRID15148359 details
DNM3B_HUMANSIN3A_HUMANBioGRID15148359 details
DNM3B_HUMANH11_HUMANBioGRID20923784 details
DNM3B_HUMANCBX1_HUMANBioGRID, HPRD12867029 20923784 details
DNM3B_HUMANCUL1_HUMANBioGRID20847044 details
DNM3B_HUMANCUL2_HUMANBioGRID20847044 details
DNM3B_HUMANCUL3_HUMANBioGRID20847044 details
DNM3B_HUMANCUL5_HUMANBioGRID20847044 details
DNM3B_HUMANCUL4A_HUMANBioGRID20847044 details
DNM3B_HUMANPIAS1_HUMANBioGRID20966256 details
DNM3B_HUMANUHRF2_HUMANBioGRID22064703 details
DNM3B_HUMANTIF1B_HUMANBioGRID22055183 details
DNM3B_HUMANZFP57_HUMANBioGRID22055183 details
DNM3B_HUMANCREB1_HUMANBioGRID19786833 details
DNM3B_HUMANEPHB1_HUMANBioGRID19786833 details
DNM3B_HUMANPAF1_HUMANBioGRID21406692 details
DNM3B_HUMANCDC73_HUMANBioGRID21406692 details
DNM3B_HUMANCHD4_HUMANBioGRID23708667 details
DNM3B_HUMANMTA1_HUMANBioGRID23708667 details
DNM3B_HUMANMTA2_HUMANBioGRID23708667 details
DNM3B_HUMANRBBP4_HUMANBioGRID23708667 details
DNM3B_HUMANRBBP7_HUMANBioGRID23708667 details
DNM3B_HUMANTF65_HUMANBioGRID24952347 details
DNM3B_HUMANHIC1_HUMANBioGRID27720955 details
DNM3B_HUMANZBT7A_HUMANBioGRID23658227 details
DNM3B_HUMANBCOR_HUMANBioGRID23658227 details
DNM3B_HUMANMAFG_HUMANBioGRID25219500 details
DNM3B_HUMANBACH1_HUMANBioGRID25219500 details
DNM3B_HUMANCHD8_HUMANBioGRID25219500 details
DNM3B_HUMANZBT24_HUMANBioGRID30085123 details
DNM3B_HUMANZBT18_HUMANHPRD11350943 details