Entity Details

Primary name COL2A1
Entity type gene
Source Source Link

Details

PrimaryID1280
RefseqGeneNG_008072
SymbolCOL2A1
Namecollagen type II alpha 1 chain
Chromosome12
Location12q13.11
TaxID9606
Statuslive
SourceGenomegenomic
SourceOriginnatural
CreationDate1994-01-14
ModificationDate2021-06-19

Ontological Relatives

UniProt IDsCO2A1_HUMAN

GO terms

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GOName
GO:0001501 skeletal system development
GO:0001502 cartilage condensation
GO:0001894 tissue homeostasis
GO:0001958 endochondral ossification
GO:0002062 chondrocyte differentiation
GO:0003007 heart morphogenesis
GO:0005201 extracellular matrix structural constituent
GO:0005576 extracellular region
GO:0005581 collagen trimer
GO:0005585 collagen type II trimer
GO:0005604 basement membrane
GO:0005615 extracellular space
GO:0005788 endoplasmic reticulum lumen
GO:0006029 proteoglycan metabolic process
GO:0007417 central nervous system development
GO:0007601 visual perception
GO:0007605 sensory perception of sound
GO:0010468 regulation of gene expression
GO:0030020 extracellular matrix structural constituent conferring tensile strength
GO:0030198 extracellular matrix organization
GO:0030199 collagen fibril organization
GO:0030903 notochord development
GO:0031012 extracellular matrix
GO:0042289 MHC class II protein binding
GO:0042472 inner ear morphogenesis
GO:0042802 identical protein binding
GO:0043394 proteoglycan binding
GO:0046872 metal ion binding
GO:0048407 platelet-derived growth factor binding
GO:0050776 regulation of immune response
GO:0051216 cartilage development
GO:0060021 roof of mouth development
GO:0060174 limb bud formation
GO:0060272 embryonic skeletal joint morphogenesis
GO:0060351 cartilage development involved in endochondral bone morphogenesis
GO:0062023 collagen-containing extracellular matrix
GO:0071599 otic vesicle development
GO:0071773 cellular response to BMP stimulus
GO:0097065 anterior head development
GO:2001240 negative regulation of extrinsic apoptotic signaling pathway in absence of ligand

Diseases

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Disease IDSourceNameDescription
183900 OMIMSpondyloepiphyseal dysplasia congenital type (SEDC)Disorder characterized by disproportionate short stature and pleiotropic involvement of the skeletal and ocular systems. The disease is caused by variants affecting the gene represented in this entry.
108300 OMIMStickler syndrome 1 (STL1)An autosomal dominant form of Stickler syndrome, an inherited disorder that associates ocular signs with more or less complete forms of Pierre Robin sequence, bone disorders and sensorineural deafness. Ocular disorders may include juvenile cataract, myopia, strabismus, vitreoretinal or chorioretinal degeneration, retinal detachment, and chronic uveitis. Pierre Robin sequence includes an opening in the roof of the mouth (a cleft palate), a large tongue (macroglossia), and a small lower jaw (micrognathia). Bones are affected by slight platyspondylisis and large, often defective epiphyses. Juvenile joint laxity is followed by early signs of arthrosis. The degree of hearing loss varies among affected individuals and may become more severe over time. Syndrome expressivity is variable. The disease is caused by variants affecting the gene represented in this entry.
132450 OMIMMultiple epiphyseal dysplasia with myopia and conductive deafness (EDMMD)A generalized skeletal dysplasia associated with significant morbidity. Joint pain, joint deformity, waddling gait, and short stature are the main clinical signs and symptoms. EDMMD is an autosomal dominant disorder characterized by epiphyseal dysplasia associated with progressive myopia, retinal thinning, crenated cataracts, conductive deafness. The disease is caused by variants affecting the gene represented in this entry.
150600 OMIMLegg-Calve-Perthes disease (LCPD)Characterized by loss of circulation to the femoral head, resulting in avascular necrosis in a growing child. Clinical pictures of the disease vary, depending on the phase of disease progression through ischemia, revascularization, fracture and collapse, and repair and remodeling of the bone. The disease is caused by variants affecting the gene represented in this entry.
616583 OMIMSpondyloepiphyseal dysplasia, Stanescu type (SEDSTN)An autosomal dominant spondyloepiphyseal dysplasia characterized by glycoproteins accumulation in chondrocytes. Clinical features include progressive joint contractures, premature degenerative joint disease particularly in the knee, hip and finger joints, and osseous distention of the metaphyseal ends of the phalanges causing swolling of interphalangeal joints of the hands. Radiological features include generalized platyspondyly, hypoplastic pelvis, epiphyseal flattening with metaphyseal splaying of the long bones, and enlarged phalangeal epimetaphyses of the hands. The disease is caused by variants affecting the gene represented in this entry.
156550 OMIMKniest dysplasia (KD)Moderately severe chondrodysplasia phenotype that results from mutations in the COL2A1 gene. Characteristics of the disorder include a short trunk and extremities, mid-face hypoplasia, cleft palate, myopia, retinal detachment, and hearing loss. The disease is caused by variants affecting the gene represented in this entry.
271700 OMIMSpondyloperipheral dysplasia (SPD)SPD patients manifest short stature, midface hypoplasia, sensorineural hearing loss, spondyloepiphyseal dysplasia, platyspondyly and brachydactyly. The disease is caused by variants affecting the gene represented in this entry.
604864 OMIMOsteoarthritis with mild chondrodysplasia (OSCDP)Osteoarthritis is a common disease that produces joint pain and stiffness together with radiologic evidence of progressive degeneration of joint cartilage. The disease is caused by variants affecting the gene represented in this entry.
609508 OMIMStickler syndrome 1 non-syndromic ocular (STL1O)An autosomal dominant form of Stickler syndrome characterized by the ocular signs typically seen in Stickler syndrome type 1 such as cataract, myopia, retinal detachment. Systemic features of premature osteoarthritis, cleft palate, hearing impairment, and craniofacial abnormalities are either absent or very mild. The disease is caused by variants affecting the gene represented in this entry.
609508 OMIMStickler syndrome 1 non-syndromic ocular (STL1O)An autosomal dominant form of Stickler syndrome characterized by the ocular signs typically seen in Stickler syndrome type 1 such as cataract, myopia, retinal detachment. Systemic features of premature osteoarthritis, cleft palate, hearing impairment, and craniofacial abnormalities are either absent or very mild. The disease is caused by variants affecting the gene represented in this entry.
151210 OMIMPlatyspondylic lethal skeletal dysplasia Torrance type (PLSD-T)Platyspondylic lethal skeletal dysplasias (PLSDs) are a heterogeneous group of chondrodysplasias characterized by severe platyspondyly and limb shortening. PLSD-T is characterized by varying platyspondyly, short ribs with anterior cupping, hypoplasia of the lower ilia with broad ischial and pubic bones, and shortening of the tubular bones with splayed and cupped metaphyses. Histology of the growth plate typically shows focal hypercellularity with slightly enlarged chondrocytes in the resting cartilage and relatively well-preserved columnar formation and ossification at the chondro-osseous junction. PLSD-T is generally a perinatally lethal disease, but a few long-term survivors have been reported. The disease is caused by variants affecting the gene represented in this entry.
184250 OMIMSpondyloepimetaphyseal dysplasia, Strudwick type (SEMDSTWK)A bone disease characterized by disproportionate short stature from birth, with a very short trunk and shortened limbs, and skeletal abnormalities including lordosis, scoliosis, flattened vertebrae, pectus carinatum, coxa vara, clubfoot, and abnormal epiphyses or metaphyses. A distinctive radiographic feature is irregular sclerotic changes, described as dappled in the metaphyses of the long bones. The disease is caused by variants affecting the gene represented in this entry.
200610 OMIMAchondrogenesis 2 (ACG2)An autosomal dominant disease characterized by the absence of ossification in the vertebral column, sacrum and pubic bones. The disease is caused by variants affecting the gene represented in this entry.
608805 OMIMAvascular necrosis of femoral head, primary, 1 (ANFH1)A disease characterized by mechanical failure of the subchondral bone, and degeneration of the hip joint. It usually leads to destruction of the hip joint in the third to fifth decade of life. The clinical manifestations, such as pain on exertion, a limping gait, and a discrepancy in leg length, cause considerable disability. ANFH1 inheritance is autosomal dominant. The disease is caused by variants affecting the gene represented in this entry.
609162 OMIMCzech dysplasia (CZECHD)A skeletal dysplasia characterized by early-onset, progressive pseudorheumatoid arthritis, platyspondyly, and short third and fourth toes. The disease is caused by variants affecting the gene represented in this entry.

Interactions

56 interactions

InteractorPartnerSourcesPublicationsLink
COL2A1COCHMINT19013156 details
COL2A1HYAL1BioGRID, IntAct21988832 details
COL2A1RELABioGRID, IntAct21988832 details
COL2A1KEAP1BioGRID, IntAct32296183 details
COL2A1COL9A1BioGRID, IntAct11724554 26186194 28514442 details
COL2A1CASP6IntAct32814053 details
COL2A1FGFR3IntAct32814053 details
COL2A1GRIN2CIntAct32814053 details
COL2A1GSNIntAct32814053 details
COL2A1HIP1IntAct32814053 details
COL2A1LAMP2IntAct32814053 details
COL2A1UBQLN1IntAct32814053 details
COL2A1PRPF40AIntAct32814053 details
COL2A1COQ8AIntAct32814053 details
COL2A1BMP2BioGRID, HPRD10085302 details
COL2A1TGFB1BioGRID, HPRD10085302 details
COL2A1PRELPBioGRID, HPRD11847210 details
COL2A1ITGA2BBioGRID, HPRD10772239 7520045 details
COL2A1THBS1BioGRID, HPRD3571333 details
COL2A1MAGBioGRID, HPRD2446864 details
COL2A1ANXA5BioGRID, HPRD1397263 details
COL2A1PKD1BioGRID, HPRD11406351 details
COL2A1PDIA2BioGRID12485997 details
COL2A1PDGFABioGRID8900172 details
COL2A1PDGFBBioGRID8900172 details
COL2A1HTRA1HPRD15101818 details
COL2A1PCOLCEHPRD12393877 details
COL2A1MATN1HPRD10196235 details
COL2A1COL2A1HPRD8660302 details
COL2A1COL6A1HPRD1544908 details
COL2A1COL9A2HPRD11724554 details
COL2A1COL9A3HPRD11724554 details
COL2A1MMP13HPRD8609233 details
COL2A1C1QAHPRD8778019 details
COL2A1FN1HPRD2229073 3997552 details
COL2A1FGF7HPRD11973338 details
COL2A1SPARCHPRD2745554 details
COL2A1BGNHPRD2059554 details
COL2A1COMPHPRD9685393 details
COL2A1DDR1HPRD9659900 details
COL2A1TGFBIHPRD9061001 details
COL2A1CHADHPRD11445564 details
COL2A1TNFRSF10AHPRD9811967 details
COL2A1LOXL4HPRD11292829 details
COL2A1MMP1HPRD8609233 details
COL2A1C1QTNF9BioGRID, IntAct26186194 28514442 details
COL2A1C1QTNF2BioGRID, IntAct26186194 28514442 details
COL2A1FKBP9BioGRID, IntAct28514442 details
COL2A1MMP9BioGRID, IntAct28514442 details
COL2A1CNPY2BioGRID, IntAct28514442 details
COL2A1MMP2BioGRID, IntAct28514442 details
COL2A1COLGALT2BioGRID, IntAct28514442 details
COL2A1PLOD1BioGRID, IntAct28514442 details
COL2A1COL1A1matrixdb26848503 details
COL2A1COL8A2BioGRID26186194 28514442 details
COL2A1AGR2BioGRID30575818 details