Entity Details

Primary name RUNX2_HUMAN
Entity type UniProt
Source Source Link

Details

AccessionQ13950
EntryNameRUNX2_HUMAN
FullNameRunt-related transcription factor 2
TaxID9606
Evidenceevidence at protein level
Length521
SequenceStatuscomplete
DateCreated2001-11-02
DateModified2021-06-02

Ontological Relatives

GenesRUNX2

GO terms

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GOName
GO:0000785 chromatin
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001503 ossification
GO:0001649 osteoblast differentiation
GO:0002062 chondrocyte differentiation
GO:0003700 DNA-binding transcription factor activity
GO:0005524 ATP binding
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005829 cytosol
GO:0006357 regulation of transcription by RNA polymerase II
GO:0030097 hemopoiesis
GO:0030182 neuron differentiation
GO:0030509 BMP signaling pathway
GO:0045595 regulation of cell differentiation
GO:0045669 positive regulation of osteoblast differentiation
GO:0045892 negative regulation of transcription, DNA-templated
GO:0045893 positive regulation of transcription, DNA-templated
GO:0045944 positive regulation of transcription by RNA polymerase II
GO:0060260 regulation of transcription initiation from RNA polymerase II promoter
GO:0071773 cellular response to BMP stimulus
GO:1901522 positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus
GO:1990837 sequence-specific double-stranded DNA binding

Subcellular Location

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Subcellular Location
Nucleus

Domains

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DomainNameCategoryType
IPR000040 Acute myeloid leukemia 1 protein (AML1)/RuntFamilyFamily
IPR008967 p53-like transcription factor, DNA-bindingFamilyHomologous superfamily
IPR012346 p53/RUNT-type transcription factor, DNA-binding domain superfamilyFamilyHomologous superfamily
IPR013524 Runt domainDomainDomain
IPR013711 Runx, C-terminal domainDomainDomain
IPR016554 Runt-related transcription factor RUNXFamilyFamily
IPR027384 Runx, central domain superfamilyFamilyHomologous superfamily

Diseases

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Disease IDSourceNameDescription
119600 OMIMCleidocranial dysplasia (CLCD)Autosomal dominant skeletal disorder with high penetrance and variable expressivity. It is due to defective endochondral and intramembranous bone formation. Typical features include hypoplasia/aplasia of clavicles, patent fontanelles, wormian bones (additional cranial plates caused by abnormal ossification of the calvaria), supernumerary teeth, short stature, and other skeletal changes. In some cases defects in RUNX2 are exclusively associated with dental anomalies. The disease is caused by variants affecting the gene represented in this entry.
156510 OMIMMetaphyseal dysplasia with maxillary hypoplasia with or without brachydactyly (MDMHB)An autosomal dominant bone dysplasia characterized by metaphyseal flaring of long bones, enlargement of the medial halves of the clavicles, maxillary hypoplasia, variable brachydactyly, and dystrophic teeth. The disease is caused by variants affecting the gene represented in this entry. Analysis for copy-number variations revealed that a 105 kb duplication within RUNX2 segregated with the MDMHB phenotype in a region with maximum linkage. Real-time PCR for copy-number variation in genomic DNA in eight samples, as well as sequence analysis of fibroblast cDNA from one subject with MDMHB confirmed that affected family members were heterozygous for the presence of an intragenic duplication encompassing exons 3 to 5 of RUNX2. These three exons code for the Q/A domain and the functionally essential DNA-binding Runt domain of RUNX2. The RUNX2 duplication found in individuals with MDMHB leads to a gain of function (PubMed:23290074).

Interactions

59 interactions

InteractorPartnerSourcesPublicationsLink
RUNX2_HUMANPIN1_HUMANBioGRID, MINT24113655 details
RUNX2_HUMANSOX9_HUMANBioGRID, DIP17142326 20593410 details
RUNX2_HUMANPPM1D_HUMANDIP22065775 details
RUNX2_HUMANYAP1_HUMANBioGRID, DIP, HPRD10228168 25751140 27684187 31496812 32220262 details
RUNX2_HUMANHDAC3_HUMANBioGRID, HPRD15292260 18321663 details
RUNX2_HUMANKAT6B_HUMANBioGRID, HPRD11965546 details
RUNX2_HUMANTHOC4_HUMANBioGRID9119228 details
RUNX2_HUMANSMAD3_HUMANBioGRID, HPRD10531362 10962029 21986102 details
RUNX2_HUMANJUN_HUMANBioGRID, HPRD11274169 11641401 details
RUNX2_HUMANFOS_HUMANBioGRID, HPRD11274169 11641401 details
RUNX2_HUMANETS1_HUMANBioGRID, HPRD9794229 details
RUNX2_HUMANCHIP_HUMANBioGRID18541707 details
RUNX2_HUMANHDAC7_HUMANBioGRID17997710 details
RUNX2_HUMANRBM14_HUMANBioGRID19585539 details
RUNX2_HUMANFHL2_HUMANBioGRID16079911 details
RUNX2_HUMANZEP3_HUMANBioGRID16728642 details
RUNX2_HUMANSMUF2_HUMANBioGRID21402695 details
RUNX2_HUMANHIF1A_HUMANBioGRID22351759 details
RUNX2_HUMANSMAD6_HUMANHPRD, IntAct16299379 details
RUNX2_HUMANSMUF1_HUMANBioGRID, IntAct16299379 17215250 details
RUNX2_HUMANSMAD5_HUMANBioGRID, Molecular Connections10531362 22966907 details
RUNX2_HUMANP73_HUMANMINT25331851 details
RUNX2_HUMANUBF1_HUMANBioGRID, DIP, HPRD17251981 20160071 22393235 details
RUNX2_HUMANHDAC6_HUMANBioGRID, HPRD12391164 23618908 details
RUNX2_HUMANSMAD1_HUMANBioGRID10531362 10962029 17215250 20851880 details
RUNX2_HUMANSMAD2_HUMANBioGRID, HPRD10531362 details
RUNX2_HUMANMSX2_HUMANBioGRID, HPRD11683913 details
RUNX2_HUMANHDAC4_HUMANBioGRID, HPRD15537544 16613856 20097749 details
RUNX2_HUMANHDAC5_HUMANBioGRID15990875 16613856 details
RUNX2_HUMANKAT2B_HUMANBioGRID16613856 details
RUNX2_HUMANHDAC1_HUMANBioGRID16728531 21972143 22393235 details
RUNX2_HUMANEP300_HUMANBioGRID, HPRD12697832 16613856 16728531 20851880 details
RUNX2_HUMANBMR1A_HUMANBioGRID16613856 details
RUNX2_HUMANHES1_HUMANBioGRID16195230 details
RUNX2_HUMANXRCC6_HUMANBioGRID, HPRD12145306 12145308 details
RUNX2_HUMANXRCC5_HUMANBioGRID, HPRD12145306 12145311 details
RUNX2_HUMANCBP_HUMANBioGRID18321663 details
RUNX2_HUMANNR0B2_HUMANBioGRID19594294 details
RUNX2_HUMANSTAT3_HUMANBioGRID17702747 details
RUNX2_HUMANSUV91_HUMANBioGRID22537242 details
RUNX2_HUMANWWP1_HUMANBioGRID16728642 details
RUNX2_HUMANPML_HUMANBioGRID15331439 details
RUNX2_HUMANRB_HUMANBioGRID, HPRD15583032 details
RUNX2_HUMANP53_HUMANBioGRID23618908 details
RUNX2_HUMANPEBB_HUMANBioGRID, HPRD12434156 23333304 28500134 31253590 details
RUNX2_HUMANSTA5A_HUMANBioGRID23533197 details
RUNX2_HUMANSKP2_HUMANBioGRID26778333 details
RUNX2_HUMANWWP2_HUMANBioGRID28500134 details
RUNX2_HUMANCTBP2_HUMANBioGRID30585266 details
RUNX2_HUMANKPCD_HUMANHPRD16421932 details
RUNX2_HUMANCEBPB_HUMANHPRD11668178 details
RUNX2_HUMANCCNB1_HUMANHPRD16407259 details
RUNX2_HUMANCDK1_HUMANHPRD16407259 details
RUNX2_HUMANANDR_HUMANHPRD10521447 details
RUNX2_HUMANDVL2_HUMANHPRD15262978 details
RUNX2_HUMANM3K4_HUMANHPRD15262978 details
RUNX2_HUMANAXIN1_HUMANHPRD15262978 details
RUNX2_HUMANTAF1A_HUMANHPRD17251981 details
RUNX2_HUMANLEF1_HUMANHPRD12551949 details