| GO | Name |
| GO:0000785 | chromatin |
| GO:0000978 | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0001947 | heart looping |
| GO:0005634 | nucleus |
| GO:0006357 | regulation of transcription by RNA polymerase II |
| GO:0007417 | central nervous system development |
| GO:0009880 | embryonic pattern specification |
| GO:0009953 | dorsal/ventral pattern formation |
| GO:0030182 | neuron differentiation |
| GO:0030903 | notochord development |
| GO:0044458 | motile cilium assembly |
| GO:1902017 | regulation of cilium assembly |
| GO:1990837 | sequence-specific double-stranded DNA binding |